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SCNpilot_expt_500_p_scaffold_39847

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_39847_1

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3..512
DNA (510bp) protein (170aa)
phage integrase family protein id=12498573 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
Integrase {ECO:0000313|EMBL:CBH97703.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CP4-like integrase
SCNpilot_expt_500_p_scaffold_39847_2

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comp(490..861)
DNA (372bp) protein (124aa)
phage transcriptional regulator AlpA id=12498574 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:CBH97702.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phage transcriptional regulator AlpA
SCNpilot_expt_500_p_scaffold_39847_3

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comp(1013..1237)
DNA (225bp) protein (75aa)
conjugal transfer protein id=12498575 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CBH97701.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
conjugal transfer protein
SCNpilot_expt_500_p_scaffold_39847_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1234..1368)
DNA (135bp) protein (45aa)
trbI; Conjugative transfer protein TrbI; K03195 type IV secretion system protein VirB10 id=12498576 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
trbI1; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 4 items

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