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SCNpilot_expt_500_p_scaffold_28439

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_28439_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..760)
DNA (759bp) protein (253aa)
ATP-dependent metalloprotease ftsh (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ATP-dependent metalloprotease n=1 Tax=Acidovorax radicis RepID=UPI00023757F3
SCNpilot_expt_500_p_scaffold_28439_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(883..1536)
DNA (654bp) protein (218aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ribosomal RNA methyltransferase rrmj/ftsj; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] rbh
UPI0003D3DEF3 related cluster n=1 Tax=unknown RepID=UPI0003D3DEF3 rbh
SCNpilot_expt_500_p_scaffold_28439_3
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1568..1867
DNA (300bp) protein (100aa)
Putative RNA-binding protein containing KH domain, possibly ribosomal protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EMQ6_9BURK
RNA-binding protein {ECO:0000313|EMBL:EXU78698.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
hypothetical protein
Displaying 3 items

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