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SCNpilot_expt_500_p_scaffold_23411

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_23411_1
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..200
DNA (198bp) protein (66aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
Uronate isomerase (EC:5.3.1.12); K01812 glucuronate isomerase [EC:5.3.1.12]
glucuronate isomerase n=1 Tax=Pedobacter agri RepID=UPI00029B04DE
SCNpilot_expt_500_p_scaffold_23411_2
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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210..1235
DNA (1026bp) protein (342aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] rbh
carbohydrate kinase n=1 Tax=Pedobacter agri RepID=UPI00029AA271 rbh
Carbohydrate kinase {ECO:0000313|EMBL:KIA94597.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
SCNpilot_expt_500_p_scaffold_23411_3
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1232..1876
DNA (645bp) protein (215aa)
KDPG and KHG aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J6P9_9SPHI
KDPG and KHG aldolase {ECO:0000313|EMBL:KGE14651.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
SCNpilot_expt_500_p_scaffold_23411_4
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1992..2228
DNA (237bp) protein (79aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Z5_PEDSD
major facilitator superfamily protein; K08191 MFS transporter, ACS family, hexuronate transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADY53258.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Displaying 4 items

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