ggKbase home page

SCNpilot_expt_500_p_scaffold_5007

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5007_1
unknown

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_5007_2
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

154..762
DNA (609bp) protein (203aa)
haloacid dehalogenase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003479140
Haloacid dehalogenase {ECO:0000313|EMBL:KIA85135.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_expt_500_p_scaffold_5007_3
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

766..1377
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYM8_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU19591.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_5007_4
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1392..1802)
DNA (411bp) protein (137aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase {ECO:0000313|EMBL:AIJ38612.1}; EC=3.1.2.- {ECO:0000313|EMBL:AIJ38612.1};; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
Probable thioesterase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GYW7_FLAPJ
SCNpilot_expt_500_p_scaffold_5007_5
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2005..3432
DNA (1428bp) protein (476aa)
chromosomal replication initiation protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B429E3 rbh
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
SCNpilot_expt_500_p_scaffold_5007_6
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3505..3954
DNA (450bp) protein (150aa)
Protein tyrosine phosphatase {ECO:0000313|EMBL:ESU19588.1}; EC=3.1.3.48 {ECO:0000313|EMBL:ESU19588.1};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
low molecular weight phosphotyrosine protein phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Protein tyrosine phosphatase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYQ4_9FLAO
SCNpilot_expt_500_p_scaffold_5007_7
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3951..4667
DNA (717bp) protein (239aa)
methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] rbh
Probable methyltransferase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GYX0_FLAPJ rbh
Probable methyltransferase {ECO:0000313|EMBL:CAL43293.1}; TaxID=402612 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511).;"
SCNpilot_expt_500_p_scaffold_5007_8
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4731..5372)
DNA (642bp) protein (214aa)
LysM domain protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SM05_9FLAO
LysM domain protein {ECO:0000313|EMBL:ESU27733.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_5007_9
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5470..6384)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMT9_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD69559.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_5007_10
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6387..7280)
DNA (894bp) protein (298aa)
aminodeoxychorismate lyase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B7119A rbh
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KGO81886.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
aminodeoxychorismate lyase; K07082 UPF0755 protein rbh
Displaying 10 items

View Taxonomy