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SCNpilot_expt_500_p_scaffold_6538

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_6538_1
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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304..2250
DNA (1947bp) protein (649aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
thrS; Threonine--tRNA ligase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] rbh
threonyl-tRNA synthetase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034BEF0D rbh
SCNpilot_expt_500_p_scaffold_6538_2
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2415..2822
DNA (408bp) protein (136aa)
translation initiation factor IF-3 n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B57DC6
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000313|EMBL:CCB70501.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCNpilot_expt_500_p_scaffold_6538_3
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2986..3183
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X7H3_FLACA
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
SCNpilot_expt_500_p_scaffold_6538_4
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3344..3688
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034C422C
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
SCNpilot_expt_500_p_scaffold_6538_5
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3775..4344
DNA (570bp) protein (190aa)
Cyclic nucleotide-binding protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FP05_FLAJ1
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:KFF04086.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
cyclic nucleotide-binding protein
SCNpilot_expt_500_p_scaffold_6538_6
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4422..4856
DNA (435bp) protein (145aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
Alkylhydroperoxidase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SK21_9FLAO
alkylhydroperoxidase
SCNpilot_expt_500_p_scaffold_6538_7
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4897..5739)
DNA (843bp) protein (281aa)
asparaginase 2 (EC:3.5.1.1); K01424 L-asparaginase [EC:3.5.1.1] rbh
Asparaginase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SVU6_9FLAO rbh
Asparaginase {ECO:0000313|EMBL:ESU28550.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_500_p_scaffold_6538_8
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5742..6038)
DNA (297bp) protein (99aa)
cphB; cyanophycinase (EC:3.-.-.-); K13282 cyanophycinase [EC:3.4.15.6]
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003718B75
Cyanophycinase {ECO:0000313|EMBL:KIA87721.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Displaying 8 items

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