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SCNpilot_expt_500_p_scaffold_851

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_851_1
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2..1045)
DNA (1044bp) protein (348aa)
penicillin-binding protein 1A n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B70101
Penicillin-binding protein 1A {ECO:0000313|EMBL:KDN54142.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
glycosyl transferase
SCNpilot_expt_500_p_scaffold_851_2
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1051..1536)
DNA (486bp) protein (162aa)
gliding motility protein GldH n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B47F19
hypothetical protein
Gliding motility lipoprotein GldH; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_p_scaffold_851_3
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1520..2842)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000364890D rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA97718.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
PSP1 domain-containing protein rbh
SCNpilot_expt_500_p_scaffold_851_4
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3020..4399)
DNA (1380bp) protein (460aa)
UPF0176 protein FP0022 n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GVL9_FLAPJ rbh
UPF0176 protein SU65_01915 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
yceA; hypothetical protein; K07146 UPF0176 protein rbh
SCNpilot_expt_500_p_scaffold_851_5
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4579..4989)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO90305.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
Uncharacterized protein id=4402480 bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
hypothetical protein
SCNpilot_expt_500_p_scaffold_851_6
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5090..6232)
DNA (1143bp) protein (381aa)
Lycopene beta cyclase {ECO:0000313|EMBL:EIA09885.1}; EC=1.14.-.- {ECO:0000313|EMBL:EIA09885.1};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
lycopene beta and epsilon cyclase; K06443 lycopene beta-cyclase [EC:5.5.1.19] rbh
Lycopene beta cyclase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FN96_9FLAO rbh
SCNpilot_expt_500_p_scaffold_851_7
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6254..6712)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000374B67B
Uncharacterized protein {ECO:0000313|EMBL:ESU21907.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
thioredoxin domain-containing protein
SCNpilot_expt_500_p_scaffold_851_8
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6715..8976)
DNA (2262bp) protein (754aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000365F7D5 rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGO90307.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
TonB-dependent Receptor rbh
SCNpilot_expt_500_p_scaffold_851_9
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9065..10936
DNA (1872bp) protein (624aa)
iron transporter n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034C4EA0 rbh
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
Mn2+/Fe2+ transporter; K03322 manganese transport protein rbh
SCNpilot_expt_500_p_scaffold_851_10
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10965..11618
DNA (654bp) protein (218aa)
Iron dependent repressor n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FLF4_FLAJ1 rbh
Contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23177.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator rbh
SCNpilot_expt_500_p_scaffold_851_11
unknown

Not on your lists

comp(11615..11740)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_851_12
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11794..14031)
DNA (2238bp) protein (746aa)
Ferrous iron transport protein B n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RAB3_CELLC rbh
ferrous iron transport protein B; K04759 ferrous iron transport protein B rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:ADY29457.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC; 14961 / NCIMB 1423 / VKM B-1433 / Cy l20).;"
SCNpilot_expt_500_p_scaffold_851_13
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14028..14264)
DNA (237bp) protein (79aa)
FeoA protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S963_9FLAO
Iron transporter {ECO:0000313|EMBL:KGO83211.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
FeoA family protein; K04758 ferrous iron transport protein A
SCNpilot_expt_500_p_scaffold_851_14
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14492..14926
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2IUB5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGD69439.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_851_15
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14970..15644)
DNA (675bp) protein (225aa)
Cytochrome c oxidase biogenesis protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6ST51_9FLAO rbh
Cytochrome C oxidase assembly protein {ECO:0000313|EMBL:KGO83210.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
electron transport protein SCO1/SenC; K07152 rbh
SCNpilot_expt_500_p_scaffold_851_16
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15790..17823
DNA (2034bp) protein (678aa)
M13 family metallopeptidase PepO precursor; K07386 putative endopeptidase [EC:3.4.24.-] rbh
endothelin-converting protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B54FCE rbh
Endothelin-converting protein {ECO:0000313|EMBL:KGO90314.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
SCNpilot_expt_500_p_scaffold_851_17
unknown

Not on your lists

comp(17856..18473)
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_851_18
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18470..19279)
DNA (810bp) protein (270aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FLL6_FLAJ1 rbh
Epimerase {ECO:0000313|EMBL:KIA86870.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
NAD-dependent epimerase/dehydratase rbh
SCNpilot_expt_500_p_scaffold_851_19
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19260..21647)
DNA (2388bp) protein (796aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000376318E rbh
Peptidase M28 {ECO:0000313|EMBL:KIA86869.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
peptidase M28 rbh
SCNpilot_expt_500_p_scaffold_851_20
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21658..22023)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GVT0_FLAPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL42202.1}; TaxID=402612 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511).;"
SCNpilot_expt_500_p_scaffold_851_21
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22146..23672)
DNA (1527bp) protein (509aa)
carbon-nitrogen hydrolase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B44571 rbh
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:KGO91399.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase rbh
SCNpilot_expt_500_p_scaffold_851_22
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23858..24190
DNA (333bp) protein (111aa)
single-stranded DNA-binding protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002F0B2FB
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
single-strand binding protein; K03111 single-strand DNA-binding protein
SCNpilot_expt_500_p_scaffold_851_23
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24310..25212)
DNA (903bp) protein (301aa)
deacetylase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5DADE rbh
Deacetylase {ECO:0000313|EMBL:KGO83198.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
Histone deacetylase family protein rbh
SCNpilot_expt_500_p_scaffold_851_24
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25222..26538)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000369EC7B rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO91376.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
Displaying 24 items

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