ggKbase home page

SCNpilot_expt_500_p_scaffold_2130

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2130_1
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

115..720
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FNK6_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA98029.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_2130_2
unknown

Not on your lists

727..930
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2130_3
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

986..2026
DNA (1041bp) protein (347aa)
Probable heptosyltransferase involved in lipopolysaccharide core biosynthesis id=2836412 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes rbh
Heptosyltransferase {ECO:0000313|EMBL:KFF17994.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
heptosyltransferase involved in lipopolysaccharide core biosynthesis rbh
SCNpilot_expt_500_p_scaffold_2130_4
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2037..2936)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FI13_FLAJ1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ05164.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_p_scaffold_2130_5
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3086..3448
DNA (363bp) protein (121aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
speD; Adenosylmethionine decarboxylase (EC:4.1.1.50); K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50]
Adenosylmethionine decarboxylase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S5N0_9FLAO
SCNpilot_expt_500_p_scaffold_2130_6
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3448..4668
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SDZ8_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU29707.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_2130_7
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4745..5092
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XNP9_FLAIG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG52166.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
SCNpilot_expt_500_p_scaffold_2130_8
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5085..6602
DNA (1518bp) protein (506aa)
spermidine synthase (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16] rbh
Spermidine synthase n=1 Tax=Flavobacterium sp. F52 RepID=J1KTM7_9FLAO rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
SCNpilot_expt_500_p_scaffold_2130_9
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6580..8214
DNA (1635bp) protein (545aa)
Putative twin-arginine translocation pathway signal protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6SBG0_9FLAO rbh
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:KFF16400.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
putative twin-arginine translocation pathway signal protein rbh
SCNpilot_expt_500_p_scaffold_2130_10
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8195..9211
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KSS2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO93848.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_2130_11
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9262..10401)
DNA (1140bp) protein (380aa)
ferredoxin n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034CE1E7 rbh
Flavodoxin reductase {ECO:0000313|EMBL:KIA86982.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
ferredoxin; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE rbh
SCNpilot_expt_500_p_scaffold_2130_12
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10439..10774
DNA (336bp) protein (112aa)
Putative uncharacterized protein id=2836428 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF1_Flavobacteria_32_7_curated
SCNpilot_expt_500_p_scaffold_2130_13
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10776..11444
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C429_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ38372.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2130_14
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11499..12197
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B64745
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10002.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2130_15
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12252..12965
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B69530
Uncharacterized protein {ECO:0000313|EMBL:KIA86983.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
Displaying 15 items

View Taxonomy