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SCNpilot_expt_500_p_scaffold_2547

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2547_1
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..2619)
DNA (2619bp) protein (873aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] rbh
Carbamoyl-phosphate synthase large subunit n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6W0_FLABF rbh
SCNpilot_expt_500_p_scaffold_2547_2
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3079..3552
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C8E3_9FLAO
Membrane protein {ECO:0000313|EMBL:KIA87631.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2547_3
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3646..4539)
DNA (894bp) protein (298aa)
putative membrane-bound lytic murein transglycosylase (EC:3.2.1.-) rbh
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000364A80F rbh
Murein transglycosylase {ECO:0000313|EMBL:KGO87527.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
SCNpilot_expt_500_p_scaffold_2547_4
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4597..5259)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FLQ4_9FLAO rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KIA99175.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2547_5
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5455..5739
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B37A3B
Acetyltransferase {ECO:0000313|EMBL:KGD69649.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2547_6
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6092..6427
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B55CAB
Uncharacterized protein {ECO:0000313|EMBL:KGD69648.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
SCNpilot_expt_500_p_scaffold_2547_7
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6442..7773)
DNA (1332bp) protein (444aa)
MiaB-like tRNA modifying protein (EC:1.3.1.74); K08070 2-alkenal reductase [EC:1.3.1.74] rbh
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ABQ08038.1}; EC=1.3.1.74 {ECO:0000313|EMBL:ABQ08038.1};; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
MiaB-like tRNA modifying enzyme n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5F9T5_FLAJ1 rbh
SCNpilot_expt_500_p_scaffold_2547_8
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7866..9485
DNA (1620bp) protein (540aa)
Dipeptide-binding ABC transporter, periplasmic substrate-binding component n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRF4_9FLAO rbh
Dipeptide-binding ABC transporter, periplasmic substrate-binding component {ECO:0000313|EMBL:EIA08937.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
dipeptide ABC transporter substrate-binding protein rbh
SCNpilot_expt_500_p_scaffold_2547_9
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9571..10242
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037CA974 rbh
Transcriptional regulator {ECO:0000313|EMBL:KFF09717.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
transcriptional regulatory protein ciaR rbh
SCNpilot_expt_500_p_scaffold_2547_10
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10242..11483
DNA (1242bp) protein (414aa)
sensor protein (EC:2.7.13.3) rbh
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000368C6B1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC00473.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
Displaying 10 items

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