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SCNpilot_expt_500_p_scaffold_2564

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2564_1
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..359)
DNA (357bp) protein (119aa)
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-pyruvoyl tetrahydropterin synthase/QueD family protein n=2 Tax=Myroides RepID=K1HPZ7_9FLAO
6-pyruvoyl tetrahydropterin synthase {ECO:0000313|EMBL:KGD69101.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
SCNpilot_expt_500_p_scaffold_2564_2
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(384..1394)
DNA (1011bp) protein (337aa)
Enoyl-CoA hydratase/isomerase; K13766 methylglutaconyl-CoA hydratase [EC:4.2.1.18] rbh
Methylglutaconyl-CoA hydratase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SPP1_9FLAO rbh
Methylglutaconyl-CoA hydratase {ECO:0000313|EMBL:ESU28167.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_500_p_scaffold_2564_3
unknown

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1399..1716
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2564_4
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1716..2117
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X4W3_FLACA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW86779.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
SCNpilot_expt_500_p_scaffold_2564_5
unknown

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comp(2150..2380)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2564_6
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2367..2636)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KYR9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJG03423.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
SCNpilot_expt_500_p_scaffold_2564_7
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2717..3196
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC17999.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
SCNpilot_expt_500_p_scaffold_2564_8
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3323..4003
DNA (681bp) protein (227aa)
Probable two-component system response regulatory protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUZ8_FLAIG
Transcriptional regulator {ECO:0000313|EMBL:KFF17503.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
two-component system response regulatory protein; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
SCNpilot_expt_500_p_scaffold_2564_9
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4003..5367
DNA (1365bp) protein (455aa)
Two-component system sensor histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CCG52967.1};; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
Two-component system sensor histidine kinase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUZ7_FLAIG
SCNpilot_expt_500_p_scaffold_2564_10
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5559..6269
DNA (711bp) protein (237aa)
Mg2+ transporter-C family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPX2_9SPHI rbh
Magnesium transporter MgtC {ECO:0000313|EMBL:KFF17501.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_expt_500_p_scaffold_2564_11
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6372..9077
DNA (2706bp) protein (902aa)
mgtA; magnesium-importing ATPase (EC:3.6.3.2); K01531 Mg2+-importing ATPase [EC:3.6.3.2] rbh
Magnesium-transporting ATPase n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J4R7_9SPHI rbh
Magnesium ABC transporter ATPase {ECO:0000313|EMBL:KFF17500.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
SCNpilot_expt_500_p_scaffold_2564_12
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9138..9761)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JXE9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR72858.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2564_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9923..11440)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAZ8_FLUTR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA45322.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying 13 items

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