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SCNpilot_expt_500_p_scaffold_2918

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2918_1
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..324
DNA (324bp) protein (108aa)
Beta-lactamase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRR8_9FLAO
Beta-lactamase {ECO:0000313|EMBL:KIA85510.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
beta-lactamase
SCNpilot_expt_500_p_scaffold_2918_2
unknown

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comp(336..545)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2918_3
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(558..1790)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000366FA77
Uncharacterized protein {ECO:0000313|EMBL:KGO87562.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
TRNA modification GTPase
SCNpilot_expt_500_p_scaffold_2918_4
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1832..2785)
DNA (954bp) protein (318aa)
Signal recognition particle receptor FtsY n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5F9Y8_FLAJ1 rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor rbh
SCNpilot_expt_500_p_scaffold_2918_5
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2954..3106)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Imtechella halotolerans K1 RepID=I0WGQ8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EID75574.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2918_6
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3116..3298)
DNA (183bp) protein (61aa)
50S ribosomal protein L33 n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255B161
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
SCNpilot_expt_500_p_scaffold_2918_7
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3326..3562)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Flavobacterium rivuli RepID=UPI00035CF273
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
SCNpilot_expt_500_p_scaffold_2918_8
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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comp(3717..4619)
DNA (903bp) protein (301aa)
Putative uncharacterized protein id=1763504 bin=GWE2_Bacteroidetes_29_8 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
SCNpilot_expt_500_p_scaffold_2918_9
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4736..5998)
DNA (1263bp) protein (421aa)
competence damage-inducible protein A n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034A4D8F rbh
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA rbh
CinA-like protein {ECO:0000255|HAMAP-Rule:MF_00226}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_p_scaffold_2918_10
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6030..6374)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRQ5_9FLAO
Histidine kinase {ECO:0000313|EMBL:KIC00218.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2918_11
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6374..6985)
DNA (612bp) protein (204aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZJ0_FLAPJ rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KIC00219.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
fumarylacetoacetate hydrolase rbh
SCNpilot_expt_500_p_scaffold_2918_12
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7016..7792)
DNA (777bp) protein (259aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
Exonuclease n=1 Tax=Flavobacterium sp. F52 RepID=J1KP44_9FLAO rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KFF02455.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
SCNpilot_expt_500_p_scaffold_2918_13
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7913..9223)
DNA (1311bp) protein (437aa)
dehydrogenase catalytic domain-containing protein; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] rbh
Dihydrolipoamide acetyltransferase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2K9_9FLAO rbh
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:ESU20634.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
SCNpilot_expt_500_p_scaffold_2918_14
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9371..10552)
DNA (1182bp) protein (394aa)
Candidate beta-D/alpha-L-glycosyltransferase Glycosyltransferase family 2 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5F9X9_FLAJ1 rbh
glycosyl transferase family protein rbh
Candidate beta-D/alpha-L-glycosyltransferase Glycosyltransferase family 2 {ECO:0000313|EMBL:ABQ07988.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
Displaying 14 items

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