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SCNpilot_expt_500_p_scaffold_4627

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4627_1
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..419)
DNA (417bp) protein (139aa)
pdhB; pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J2D0_9FLAO
Pyruvate dehydrogenase E1 component {ECO:0000313|EMBL:EAZ96485.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
SCNpilot_expt_500_p_scaffold_4627_2
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(574..1758)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000374DFB4 rbh
MFS transporter {ECO:0000313|EMBL:KFF15061.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
major facilitator superfamily protein rbh
SCNpilot_expt_500_p_scaffold_4627_3
unknown

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comp(1758..1895)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_4627_4
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1968..2714
DNA (747bp) protein (249aa)
Electron transfer flavoprotein beta-subunit n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FJW1_FLAJ1 rbh
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:KFF07006.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit rbh
SCNpilot_expt_500_p_scaffold_4627_5
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2815..3783
DNA (969bp) protein (323aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Flavobacterium sp. CF136 RepID=J2JDP7_9FLAO rbh
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:EJL66110.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit rbh
SCNpilot_expt_500_p_scaffold_4627_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3942..4565
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003449025 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA82700.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein; K08999 hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_4627_7
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4611..5435
DNA (825bp) protein (275aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] rbh
Thymidylate synthase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6ST33_9FLAO rbh
SCNpilot_expt_500_p_scaffold_4627_8
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5451..6389
DNA (939bp) protein (313aa)
TonB family protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FQL9_9FLAO
TonB family protein {ECO:0000313|EMBL:EIA09149.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4627_9

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6461..6799
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SJL6_9FLAO
2TM domain protein {ECO:0000313|EMBL:AIA14884.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4627_10
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6811..7293
DNA (483bp) protein (161aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9P7_9FLAO
Displaying 10 items

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