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SCNpilot_expt_500_p_scaffold_3201

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3201_1
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..144)
DNA (144bp) protein (48aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family protein n=1 Tax=Flavobacterium sp. F52 RepID=J0RKZ6_9FLAO
hydrophobe/amphiphile efflux-1 (HAE1) family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Hydrophobe/amphiphile efflux-1 (HAE1) family protein {ECO:0000313|EMBL:EJF99681.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
SCNpilot_expt_500_p_scaffold_3201_2
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(354..1433)
DNA (1080bp) protein (360aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FAB1_FLAJ1 rbh
Hemolysin D {ECO:0000313|EMBL:KIA97096.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
RND family efflux transporter MFP subunit rbh
SCNpilot_expt_500_p_scaffold_3201_3
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1613..2002)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2J6Q3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA97097.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3201_4
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2167..3042)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003823A59 rbh
Clan AA aspartic protease {ECO:0000313|EMBL:KFF02245.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3201_5
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3189..4034
DNA (846bp) protein (282aa)
DUF6 protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FTL5_9FLAO rbh
Transporter {ECO:0000313|EMBL:KIA85700.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein; K11939 inner membrane transporter RhtA rbh
SCNpilot_expt_500_p_scaffold_3201_6
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4035..4784)
DNA (750bp) protein (250aa)
LytTR family transcriptional regulator n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034DF677
LytTR family transcriptional regulator {ECO:0000313|EMBL:KIX21461.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
LytTR family two component transcriptional regulator
SCNpilot_expt_500_p_scaffold_3201_7
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4788..6479)
DNA (1692bp) protein (564aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FJY9_FLAJ1
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_500_p_scaffold_3201_8
unknown

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comp(6627..7052)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3201_9
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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7236..7835
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00036EEC75
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_expt_500_p_scaffold_3201_10
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7857..8558
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JFZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27455.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3201_11
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8587..8868
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JKD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27456.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3201_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8889..9344
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47013.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3201_13
unknown

Not on your lists

9378..9767
DNA (390bp) protein (130aa)

This feature has no annotations

Displaying 13 items

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