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SCNpilot_expt_500_p_scaffold_7861

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_7861_1
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..1239
DNA (1239bp) protein (413aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
acnA; aconitase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
aconitate hydratase n=1 Tax=Flavobacterium rivuli RepID=UPI000381A710
SCNpilot_expt_500_p_scaffold_7861_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1294..2580)
DNA (1287bp) protein (429aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCA8_9SPHI rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EHQ30099.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
major facilitator superfamily protein rbh
SCNpilot_expt_500_p_scaffold_7861_3
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2618..3202)
DNA (585bp) protein (195aa)
Regulatory protein TetR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XST5_PEDHD
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ACU05648.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_500_p_scaffold_7861_4
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3336..3977)
DNA (642bp) protein (214aa)
MgtC/SapB transporter n=1 Tax=Flavobacterium sp. F52 RepID=J1KW29_9FLAO
MgtC/SapB transporter {ECO:0000313|EMBL:EJG02106.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_expt_500_p_scaffold_7861_5
CG_Fibrob_01, Fibrobacteria, Fibrobacteres, Fibrobacteres/Acidobacteria, Bacteria

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comp(3996..4967)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037C5D75 rbh
polysaccharide deacetylase
Tax=CG_Fibrob_01
SCNpilot_expt_500_p_scaffold_7861_6
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5111..5293)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00035C7BD1
Uncharacterized protein {ECO:0000313|EMBL:KGO85639.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
Displaying 6 items

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