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SCNpilot_expt_500_p_scaffold_1858

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1858_1
unknown

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200..427
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1858_2
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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655..1059
DNA (405bp) protein (135aa)
similar to GBE1; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
1,4-alpha-glucan-branching enzyme n=1 Tax=Rhizophagus irregularis RepID=GLGB_RHIIR
1,4-alpha-glucan branching enzyme {ECO:0000313|EMBL:EXX55504.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
SCNpilot_expt_500_p_scaffold_1858_3
Heterocephalus glaber, Heterocephalus, Rodentia, Mammalia, Chordata, Metazoa

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1346..1621
DNA (276bp) protein (92aa)
PREDICTED: 1,4-alpha-glucan-branching enzyme-like n=1 Tax=Heterocephalus glaber RepID=UPI00034F8381
Gbe1; glucan (1,4-alpha-), branching enzyme 1
1,4-alpha-glucan-branching enzyme {ECO:0000313|EMBL:EHB06167.1}; TaxID=10181 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricognathi; Bathyergidae; Heterocephalus.;" source="Heterocephalus glaber (Naked mole rat).;"
SCNpilot_expt_500_p_scaffold_1858_4
unknown

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comp(2491..2742)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1858_5
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

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4192..5454
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UQ08_SALR5
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGD79676.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
SCNpilot_expt_500_p_scaffold_1858_6
Vibrio ezurae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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6092..6736
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Vibrio ezurae NBRC 102218 RepID=U3CKA0_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:GAD78653.1}; TaxID=1219080 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio ezurae NBRC 102218.;"
leucine-rich repeat-containing protein 40-like
SCNpilot_expt_500_p_scaffold_1858_7
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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7101..10019
DNA (2919bp) protein (973aa)
Ankyrin repeat protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2FS53_TRIVA
ankyrin repeat protein
Ankyrin repeat protein, putative {ECO:0000313|EMBL:EAX92268.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
SCNpilot_expt_500_p_scaffold_1858_8
unknown

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comp(10503..10625)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1858_9
Onchocerca volvulus, Onchocerca, Spirurida, Chromadorea, Nematoda, Metazoa

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comp(11076..11429)
DNA (354bp) protein (118aa)
PREDICTED: PAS domain-containing serine/threonine-protein kinase-like n=1 Tax=Bombyx mori RepID=UPI00034FD021
PAS domain-containing serine/threonine-protein kinase-like
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:OVOC2488}; TaxID=6282 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Onchocerca.;" source="Onchocerca volvulus.;"
SCNpilot_expt_500_p_scaffold_1858_10
unknown

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comp(11858..13603)
DNA (1746bp) protein (582aa)

This feature has no annotations

Displaying 10 items

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