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SCNpilot_expt_500_p_scaffold_9876

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_9876_1
unknown

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comp(1..96)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_2
Cricetulus griseus, Cricetulus, Rodentia, Mammalia, Chordata, Metazoa

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404..637
DNA (234bp) protein (78aa)
Phosphoinositide phospholipase C {ECO:0000256|RuleBase:RU361133}; EC=3.1.4.11 {ECO:0000256|RuleBase:RU361133};; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Cricetinae; Cricetulus.;" source="Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus).;"
PREDICTED: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X2 n=1 Tax=Mesocricetus auratus RepID=UPI000359348E
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1-like
SCNpilot_expt_500_p_scaffold_9876_3
Astyanax mexicanus, Astyanax, Characiformes, Neopterygii, Chordata, Metazoa

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742..1155
DNA (414bp) protein (138aa)
Phosphoinositide phospholipase C {ECO:0000256|RuleBase:RU361133}; EC=3.1.4.11 {ECO:0000256|RuleBase:RU361133};; TaxID=7994 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; Astyanax.;" source="Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).;"
PREDICTED: LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4, partial n=1 Tax=Danio rerio RepID=UPI0003837FD2
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-4-like
SCNpilot_expt_500_p_scaffold_9876_4
unknown

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1284..1655
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_5
unknown

Not on your lists

1720..1857
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_6
unknown

Not on your lists

1854..2033
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_7
Dictyocaulus viviparus, Dictyocaulus, Rhabditida, Chromadorea, Nematoda, Metazoa

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2005..2388
DNA (384bp) protein (128aa)
Phosphoinositide phospholipase C {ECO:0000256|RuleBase:RU361133}; EC=3.1.4.11 {ECO:0000256|RuleBase:RU361133};; TaxID=29172 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Dictyocaulidae; Dictyocaulinae; Dictyocaulus.;" source="Dictyocaulus viviparus (Bovine lungworm).;"
Phospholipase C and C2 calcium-dependent membrane targeting domain containing protein n=1 Tax=Haemonchus contortus RepID=U6P5I0_HAECO
PLCL2; phospholipase C-like 2; K15370 inactive phospholipase C-like protein 2
SCNpilot_expt_500_p_scaffold_9876_8
unknown

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2812..3006
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_9
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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3302..3748
DNA (447bp) protein (149aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
PfkB domain protein id=2974096 bin=GWF2_Lentisphaerae_49_21 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
SCNpilot_expt_500_p_scaffold_9876_10
unknown

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4137..4268
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_11
unknown

Not on your lists

comp(5031..5156)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_12
unknown

Not on your lists

7835..8227
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_13
unknown

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8496..8675
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_14
unknown

Not on your lists

8672..8890
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_15
unknown

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9172..9444
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_16
unknown

Not on your lists

10884..11396
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_17
unknown

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12056..12412
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9876_18
Mycosphaerella pini, Mycosphaerella, Capnodiales, Dothideomycetidae, Ascomycota, Fungi

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13173..14498
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Mycosphaerella pini (strain NZE10 / CBS 128990) RepID=N1PM26_MYCP1
Transcription factor involved in glucose repression; K09467 zinc-finger protein CreA/MIG
Uncharacterized protein {ECO:0000313|EMBL:EME44063.1}; TaxID=675120 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; Mycosphaerella.;" source="Dothistroma septosporum (strain NZE10 / CBS 128990) (Red band needle; blight fungus) (Mycosphaerella pini).;"
Displaying 18 items

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