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SCNpilot_expt_500_p_scaffold_6106

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_6106_1
Pseudozyma antarctica, Pseudozyma, Ustilaginales, Ustilaginomycetes, Basidiomycota, Fungi

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1..285
DNA (285bp) protein (95aa)
Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}; EC=3.1.3.16 {ECO:0000256|RuleBase:RU004273};; TaxID=84753 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma.;" source="Candida antarctica (Yeast) (Trichosporon oryzae).;"
protein phosphatase 2A; K04382 protein phosphatase 2 (formerly 2A), catalytic subunit [EC:3.1.3.16]
Serine/threonine-protein phosphatase n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) RepID=D8Q443_SCHCM
SCNpilot_expt_500_p_scaffold_6106_2
Mucor circinelloides, Mucor, Mucorales, Fungi

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385..582
DNA (198bp) protein (66aa)
Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}; EC=3.1.3.16 {ECO:0000256|RuleBase:RU004273};; TaxID=1220926 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Mucorineae; Mucoraceae; Mucor.;" source="Mucor circinelloides f. circinelloides (strain 1006PhL) (Mucormycosis; agent) (Calyptromyces circinelloides).;"
ppp2ca, zgc:110641; protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform (EC:3.1.3.16); K04382 protein phosphatase 2 (formerly 2A), catalytic subunit [EC:3.1.3.16]
Serine/threonine-protein phosphatase n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) RepID=S2JFH4_MUCC1
SCNpilot_expt_500_p_scaffold_6106_3
unknown

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comp(1001..1165)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6106_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1329..1511)
DNA (183bp) protein (61aa)
long-chain-acyl-CoA synthetase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Very-long-chain acyl-CoA synthetase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BZ31_HYPNA
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS63264.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_500_p_scaffold_6106_5
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1924..2172)
DNA (249bp) protein (83aa)
long-chain-acyl-CoA synthetase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Putative fatty acid metabolism AMP-binding protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RVU6_9BRAD
Putative fatty acid metabolism AMP-binding protein {ECO:0000313|EMBL:CCD86073.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
SCNpilot_expt_500_p_scaffold_6106_6
unknown

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comp(2912..3019)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6106_7
unknown

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comp(3256..3414)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6106_8
unknown

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comp(3407..3649)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6106_9
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

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4873..6168
DNA (1296bp) protein (432aa)
Acyl-coenzyme A oxidase n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GFT5_ACACA rbh
AcylCoA oxidase rbh
Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
SCNpilot_expt_500_p_scaffold_6106_10
Parasitella parasitica, Parasitella, Mucorales, Fungi

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6412..7194
DNA (783bp) protein (261aa)
Acyl-coenzyme A oxidase n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) RepID=S2IWF8_MUCC1
Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168}; TaxID=35722 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Mucorineae; Mucoraceae; Parasitella.;" source="Parasitella parasitica.;"
AcylCoA oxidase
SCNpilot_expt_500_p_scaffold_6106_11
Oxytricha trifallax, Oxytricha, Sporadotrichida, Stichotrichia, Eukaryota

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comp(7403..8284)
DNA (882bp) protein (294aa)
Ring finger protein, putative n=1 Tax=Oxytricha trifallax RepID=J9I612_9SPIT
Ring finger protein, putative {ECO:0000313|EMBL:EJY68998.1}; TaxID=1172189 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.;" source="Oxytricha trifallax.;"
IBR domain containing protein
SCNpilot_expt_500_p_scaffold_6106_12
unknown

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comp(9367..9498)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6106_13
unknown

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9944..10093
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6106_14
Aureobasidium melanogenum, Aureobasidium, Dothideales, Dothideomycetidae, Ascomycota, Fungi

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11140..11508
DNA (369bp) protein (123aa)
Dioxygenase subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GI57_ACACA
dioxygenase subfamily protein
Aromatic compound dioxygenase {ECO:0000313|EMBL:KEQ62636.1}; TaxID=1043003 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Dothideales; Aureobasidiaceae; Aureobasidium.;" source="Aureobasidium melanogenum CBS 110374.;"
SCNpilot_expt_500_p_scaffold_6106_15
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11730..12029
DNA (300bp) protein (100aa)
Intradiol ring-cleavage dioxygenase n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PB70_STRVO
intradiol ring-cleavage dioxygenase
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:AEM80122.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
Displaying 15 items

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