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SCNpilot_expt_500_p_scaffold_6223

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_6223_1
Anopheles sinensis, Anopheles, Diptera, Neoptera, Arthropoda, Metazoa

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comp(1..756)
DNA (756bp) protein (252aa)
Cell surface protein n=3 Tax=Streptococcus ratti FA-1 = DSM 20564 RepID=J3JP49_STRRT
CG15040 gene product from transcript CG15040-RA
Uncharacterized protein {ECO:0000313|EMBL:KFB52358.1}; TaxID=74873 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles.;" source="Anopheles sinensis.;"
SCNpilot_expt_500_p_scaffold_6223_2
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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comp(1363..2073)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9SIS7_RHIID
NADH-ubiquinone reductase (H(+)-translocating) NDE1 {ECO:0000313|EMBL:EXX71296.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
alternative NAD(P)H dehydrogenase 2, mitochondrial-like
SCNpilot_expt_500_p_scaffold_6223_3
Hypholoma sublateritium, Hypholoma, Agaricales, Agaricomycetidae, Basidiomycota, Fungi

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comp(2422..2997)
DNA (576bp) protein (192aa)
hypothetical protein ; K03885 NADH dehydrogenase [EC:1.6.99.3]
Uncharacterized protein n=1 Tax=Ceriporiopsis subvermispora (strain B) RepID=M2QY38_CERS8
Uncharacterized protein {ECO:0000313|EMBL:KJA25263.1}; TaxID=945553 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Strophariaceae; Hypholoma.;" source="Hypholoma sublateritium FD-334 SS-4.;"
SCNpilot_expt_500_p_scaffold_6223_4
unknown

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3573..4844
DNA (1272bp) protein (424aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_5
unknown

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5028..5744
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_6
unknown

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6585..6812
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_7
unknown

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6864..7562
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_8
unknown

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7825..8301
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_9
unknown

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comp(8829..8969)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_10
unknown

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comp(9269..9487)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_11
unknown

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10558..10668
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_12
unknown

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10739..11092
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_13
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11133..11330
DNA (198bp) protein (66aa)
hadhaa, cb1055, hadha, im:7136067, wu:fa14c08; hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase, alpha subunit a; K07515 enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.211]
Fatty acid oxidation complex subunit alpha n=1 Tax=Alishewanella agri BL06 RepID=I8UEH0_9ALTE
Fatty acid oxidation complex subunit alpha {ECO:0000256|SAAS:SAAS00051619}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella aestuarii B11.;"
SCNpilot_expt_500_p_scaffold_6223_14
Saprolegnia diclina, Saprolegnia, Saprolegniales, Eukaryota

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11391..11630
DNA (240bp) protein (80aa)
trifunctional enzyme subunit alpha, putative; K07515 enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.211]
Uncharacterized protein n=1 Tax=Saprolegnia diclina VS20 RepID=T0QH01_9STRA
Uncharacterized protein {ECO:0000313|EMBL:EQC33996.1}; TaxID=1156394 species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Saprolegnia.;" source="Saprolegnia diclina VS20.;"
SCNpilot_expt_500_p_scaffold_6223_15
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

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11690..12184
DNA (495bp) protein (165aa)
Trifunctional protein (Fragment) n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CEM9_CAPO3
Trifunctional protein {ECO:0000313|EMBL:KJE95861.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_6223_16
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

Not on your lists

12199..12483
DNA (285bp) protein (95aa)
hypothetical protein ; K07515 enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.211]
Trifunctional enzyme subunit alpha n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UEE1_SALR5
Trifunctional enzyme subunit alpha {ECO:0000313|EMBL:EGD74991.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
SCNpilot_expt_500_p_scaffold_6223_17
Fonticula alba, Fonticula, Eukaryota

Not on your lists

12677..12886
DNA (210bp) protein (70aa)
similar to hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase, alpha subunit; K07515 enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.211]
Trifunctional protein (Fragment) n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CEM9_CAPO3
Uncharacterized protein {ECO:0000313|EMBL:KCV68676.1}; TaxID=691883 species="Eukaryota; Nucleariidae and Fonticula group; Fonticula.;" source="Fonticula alba.;"
SCNpilot_expt_500_p_scaffold_6223_18
unknown

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13082..13345
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6223_19
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

13374..13628
DNA (255bp) protein (85aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037274B9
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADI15843.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Displaying 19 items

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