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SCNpilot_expt_500_p_scaffold_11947

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_11947_1
unknown

Not on your lists

comp(1..138)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_2
Rhodosporidium toruloides, Rhodosporidium, Sporidiobolales, Microbotryomycetes, Basidiomycota, Fungi

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661..2205
DNA (1545bp) protein (515aa)
GATA transcription factor n=1 Tax=Rhodosporidium toruloides (strain NP11) RepID=M7WTJ8_RHOT1
GATA transcription factor {ECO:0000313|EMBL:EMS21406.1}; TaxID=1130832 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Rhodosporidium.;" source="Rhodosporidium toruloides (strain NP11) (Yeast) (Rhodotorula; gracilis).;"
similar to GATA-factor
SCNpilot_expt_500_p_scaffold_11947_3
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(2435..3772)
DNA (1338bp) protein (446aa)
PREDICTED: E3 ubiquitin-protein ligase TRIM71-like n=1 Tax=unknown RepID=UPI0001926355
similar to predicted protein
Predicted protein {ECO:0000313|EMBL:EDO47729.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_expt_500_p_scaffold_11947_4
unknown

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comp(3769..4089)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_5
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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comp(4101..4859)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YX27_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN55045.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_p_scaffold_11947_6
unknown

Not on your lists

5981..6196
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_7
unknown

Not on your lists

7410..7751
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_8
unknown

Not on your lists

7991..8329
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_9
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

8421..8954
DNA (534bp) protein (178aa)
camkk1, cam-kk, cam-kk1, camkka; calcium/calmodulin-dependent protein kinase kinase 1, alpha (EC:2.7.11.17); K07359 calcium/calmodulin-dependent protein kinase kinase [EC:2.7.11.17]
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7U6M5_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU01796.1, ECO:0000313|EnsemblMetazoa:CapteP120696}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
SCNpilot_expt_500_p_scaffold_11947_10
unknown

Not on your lists

9050..9190
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_11
unknown

Not on your lists

comp(10427..10708)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_12
unknown

Not on your lists

comp(10937..11068)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_13
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(11591..13171)
DNA (1581bp) protein (527aa)
Ankyrin repeat protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2FS53_TRIVA
ankyrin repeat protein
Ankyrin repeat protein, putative {ECO:0000313|EMBL:EAX92268.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
SCNpilot_expt_500_p_scaffold_11947_14
unknown

Not on your lists

comp(13143..13259)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_15
unknown

Not on your lists

comp(13598..13765)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11947_16
Rana catesbeiana, Rana, Anura, Amphibia, Chordata, Metazoa

Not on your lists

comp(13765..14340)
DNA (576bp) protein (192aa)
cbr4; carbonyl reductase 4; K11539 carbonyl reductase 4 [EC:1.1.1.-]
Carbonyl reductase 4 n=1 Tax=Lithobates catesbeiana RepID=C1C417_LITCT
Carbonyl reductase 4 {ECO:0000313|EMBL:ACO51727.1}; TaxID=8400 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Aquarana.;" source="Lithobates catesbeiana (American bullfrog) (Rana catesbeiana).;"
SCNpilot_expt_500_p_scaffold_11947_17
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14467..14835
DNA (369bp) protein (123aa)
Amidase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIR9_ACIET
amidase
Tax=RBG_13_Deltaproteobacteria_49_15_curated
SCNpilot_expt_500_p_scaffold_11947_18
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15071..16198
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Nocardiopsis salina RepID=UPI0003487C99
amidase family protein
Tax=RBG_13_Deltaproteobacteria_49_15_curated
SCNpilot_expt_500_p_scaffold_11947_19
Sporidiobolus salmonicolor, Sporidiobolus, Sporidiobolales, Microbotryomycetes, Basidiomycota, Fungi

Not on your lists

comp(16397..16747)
DNA (351bp) protein (117aa)
Small monomeric GTPase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CCH0_CAPO3
SPOSA6832_04645-mRNA-1:cds {ECO:0000313|EMBL:CEQ42781.1}; Flags: Fragment;; TaxID=5005 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Sporidiobolus.;" source="Sporobolomyces salmonicolor.;"
Ras-like protein
Displaying 19 items

View Taxonomy