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SCNpilot_expt_500_p_scaffold_4038

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4038_1
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(162..1685)
DNA (1524bp) protein (508aa)
Protoporphyrinogen oxidase-like protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HL00_CYAP4
protoporphyrinogen oxidase
Protoporphyrinogen oxidase-like protein {ECO:0000313|EMBL:ACL45232.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
SCNpilot_expt_500_p_scaffold_4038_2
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2300..2728
DNA (429bp) protein (143aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PGE4_9ACTO
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EKY14482.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_expt_500_p_scaffold_4038_3
unknown

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3608..3805
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_4038_4
Parasitella parasitica, Parasitella, Mucorales, Fungi

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4593..6350
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) RepID=S2J2G6_MUCC1
Uncharacterized protein {ECO:0000313|EMBL:CEP08086.1}; TaxID=35722 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Mucorineae; Mucoraceae; Parasitella.;" source="Parasitella parasitica.;"
probable ATP-dependent RNA helicase DDX23-like
SCNpilot_expt_500_p_scaffold_4038_5
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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6420..7376
DNA (957bp) protein (319aa)
pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative; K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] rbh
Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9SW13_RHIID rbh
Uncharacterized protein {ECO:0000313|EMBL:ESA00065.1}; TaxID=747089 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL; 43194) (Arbuscular mycorrhizal fungus) (Glomus intraradices).;"
SCNpilot_expt_500_p_scaffold_4038_6
unknown

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comp(7747..8118)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_4038_7
unknown

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8272..8406
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_4038_8
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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comp(8619..11534)
DNA (2916bp) protein (972aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1FW14_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15720320}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
ankyrin repeat protein
Displaying 8 items

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