ggKbase home page

SCNpilot_expt_500_p_scaffold_3991

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3991_1
Absidia idahoensis, Absidia, Mucorales, Fungi

Not on your lists

281..619
DNA (339bp) protein (113aa)
Uncharacterized protein (Fragment) n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9UAG8_RHIID
Uncharacterized protein {ECO:0000313|EMBL:CDS06212.1}; TaxID=572092 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Cunninghamellaceae; Absidia.;" source="Absidia idahoensis var. thermophila.;"
SCNpilot_expt_500_p_scaffold_3991_2
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

796..975
DNA (180bp) protein (60aa)
2OG-Fe(II) oxygenase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HQU9_CYAP4
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ACL45770.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
SCNpilot_expt_500_p_scaffold_3991_3
Clostridiales bacterium S7-1-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1096..1350)
DNA (255bp) protein (85aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1284708 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S7-1-4.;"
Threonine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUT9_9CLOT
SCNpilot_expt_500_p_scaffold_3991_4
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

Not on your lists

comp(1347..1592)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9UZ43_RHIID
Uncharacterized protein {ECO:0000313|EMBL:ESA20896.1}; TaxID=747089 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL; 43194) (Arbuscular mycorrhizal fungus) (Glomus intraradices).;"
TARSL2; threonyl-tRNA synthetase-like 2
SCNpilot_expt_500_p_scaffold_3991_5
Lichtheimia corymbifera, Lichtheimia, Mucorales, Fungi

Not on your lists

comp(1976..2317)
DNA (342bp) protein (114aa)
MG01322.4; hypothetical protein; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonyl-trna synthetase n=1 Tax=Ophiostoma piceae (strain UAMH 11346) RepID=S3C569_OPHP1
Threonyl-trna synthetase {ECO:0000313|EMBL:CDH51453.1}; TaxID=1263082 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Lichtheimiaceae; Lichtheimia.;" source="Lichtheimia corymbifera JMRC:FSU:9682.;"
SCNpilot_expt_500_p_scaffold_3991_6
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

comp(2758..3114)
DNA (357bp) protein (119aa)
Threonine-tRNA ligase n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GLC4_ACACA
threonine-tRNA ligase
Threonine-tRNA ligase {ECO:0000313|EMBL:ELR13604.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
SCNpilot_expt_500_p_scaffold_3991_7
unknown

Not on your lists

comp(3903..4130)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3991_8
unknown

Not on your lists

5154..5483
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3991_9
Cyanidioschyzon merolae, Cyanidioschyzon, Cyanidiales, Bangiophyceae, Eukaryota

Not on your lists

6027..6293
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae strain 10D RepID=M1VHH2_CYAME
hypothetical protein, conserved
Uncharacterized protein {ECO:0000313|EMBL:BAM82797.1}; TaxID=280699 species="Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon.;" source="Cyanidioschyzon merolae strain 10D.;"
SCNpilot_expt_500_p_scaffold_3991_10
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(7329..7517)
DNA (189bp) protein (63aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RQM6_NEMVE
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EDO46134.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_expt_500_p_scaffold_3991_11
unknown

Not on your lists

comp(7594..7716)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3991_12
unknown

Not on your lists

comp(8131..8547)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3991_13
unknown

Not on your lists

comp(8619..8783)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3991_14
Rhizopus microsporus, Rhizopus, Mucorales, Fungi

Not on your lists

comp(9025..9384)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Xenopus tropicalis RepID=F6RQV2_XENTR
Uncharacterized protein {ECO:0000313|EMBL:CEG75842.1}; TaxID=58291 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Mucorineae; Rhizopodaceae; Rhizopus.;" source="Rhizopus microsporus.;"
asnsd1; asparagine synthetase domain containing 1
SCNpilot_expt_500_p_scaffold_3991_15
Oryctolagus cuniculus, Oryctolagus, Lagomorpha, Mammalia, Chordata, Metazoa

Not on your lists

comp(9421..9687)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Oryctolagus cuniculus RepID=G1T3D6_RABIT
Uncharacterized protein {ECO:0000313|Ensembl:ENSOCUP00000010733}; TaxID=9986 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.;" source="Oryctolagus cuniculus (Rabbit).;"
similar to Asparagine synthetase domain-containing protein 1
Displaying 15 items

View Taxonomy