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SCNpilot_expt_500_p_scaffold_1212

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1212_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(141..1208)
DNA (1068bp) protein (356aa)
ABC-type molybdenum import system, permease component n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W432_UNCMA
modB; ABC-type molybdenum import system, permease component; K02018 molybdate transport system permease protein
Tax=RBG_16_Chloroflexi_68_14_curated
SCNpilot_expt_500_p_scaffold_1212_2
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1233..1442)
DNA (210bp) protein (70aa)
Molybdenum-pterin binding protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GED7_9FIRM
TOBE domain-containing protein
Molybdenum-pterin-binding protein {ECO:0000313|EMBL:AHF06202.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
SCNpilot_expt_500_p_scaffold_1212_3
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1722..2708)
DNA (987bp) protein (329aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJV4_9CHLR
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:CCF84966.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein
SCNpilot_expt_500_p_scaffold_1212_4
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3277..4296
DNA (1020bp) protein (340aa)
Putative peptidoglycan binding protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MBY4_ARTPP
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:CCQ45073.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
peptidoglycan binding protein
SCNpilot_expt_500_p_scaffold_1212_5
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(4271..4864)
DNA (594bp) protein (198aa)
HD domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VXN2_9CYAN
HD domain protein {ECO:0000313|EMBL:EDX73338.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
guanosine polyphosphate synthetase/pyrophosphohydrolase
SCNpilot_expt_500_p_scaffold_1212_6
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(4925..5473)
DNA (549bp) protein (183aa)
Dihydrofolate reductase n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RR86_SYNP3
dihydrofolate reductase
Dihydrofolate reductase {ECO:0000313|EMBL:AFY60051.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
SCNpilot_expt_500_p_scaffold_1212_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(5608..6528)
DNA (921bp) protein (307aa)
hypothetical protein id=14424528 bin=bin1_lowGC species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
sucraseferredoxin family protein
Tax=CSP1_2_Dadabacteria
SCNpilot_expt_500_p_scaffold_1212_8
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(6512..7723)
DNA (1212bp) protein (404aa)
Cupin 4 family protein n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=D5SL42_STRC2
Uncharacterized protein {ECO:0000313|EMBL:KIE09781.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1212_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7842..8081)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0U4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39013.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1212_10
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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8231..9574
DNA (1344bp) protein (448aa)
Putative uncharacterized protein id=3715715 bin=GWF2_Bacteroidetes_49_14 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
UDP-N-acetylmuramyl tripeptide synthase rbh
Tax=GWF2_Bacteroidetes_49_14_curated
SCNpilot_expt_500_p_scaffold_1212_11
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9676..10596)
DNA (921bp) protein (307aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FQ70_PAEMK rbh
phytanoyl-CoA dioxygenase rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:AEI40290.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP414).;"
SCNpilot_expt_500_p_scaffold_1212_12
unknown

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comp(10837..11496)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1212_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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11984..15226
DNA (3243bp) protein (1081aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTV7_9CHLR rbh
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:EFH83858.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
TPR repeat-containing transcriptional regulator LuxR; K03556 LuxR family transcriptional regulator, maltose regulon positive regulatory protein
SCNpilot_expt_500_p_scaffold_1212_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

15369..16679
DNA (1311bp) protein (437aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVX8_9CHLR rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH84361.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
tetA; tetracycline resistance protein, class C rbh
SCNpilot_expt_500_p_scaffold_1212_15
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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comp(16728..17393)
DNA (666bp) protein (222aa)
Transcriptional regulator, AraC family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U222_9CHLR
AraC family transcriptional regulator {ECO:0000313|EMBL:KIJ72570.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1212_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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18099..18659
DNA (561bp) protein (187aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T39_SOLUE
deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ABJ87181.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_expt_500_p_scaffold_1212_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

18808..19197
DNA (390bp) protein (130aa)
Transcriptional regulator, MerR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF65_9CHLR
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EFH90465.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transcriptional regulator
SCNpilot_expt_500_p_scaffold_1212_18
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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19263..19586
DNA (324bp) protein (108aa)
oxidoreductase (EC:1.1.1.- 1.1.-.-)
Hypothetical oxidoreductase n=1 Tax=Paenibacillus polymyxa (strain E681) RepID=E0RA20_PAEP6
NAD binding domain of 6-phosphogluconate dehydrogenase family protein {ECO:0000313|EMBL:KFN07001.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
Displaying 18 items

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