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SCNpilot_expt_500_p_scaffold_1719

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1719_1
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2..1633
DNA (1632bp) protein (544aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QP60_CYAP0
peptidase S1 and S6 chymotrypsin/Hap; K12600 superkiller protein 3
TPR repeat-containing protein {ECO:0000313|EMBL:ACK65365.1}; Flags: Precursor;; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
SCNpilot_expt_500_p_scaffold_1719_2
unknown

Not on your lists

comp(1713..2015)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1719_3
unknown

Not on your lists

2385..3191
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1719_4
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3267..4523)
DNA (1257bp) protein (419aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
Threonine synthase n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UFI6_9CHRO rbh
threonine synthase rbh
SCNpilot_expt_500_p_scaffold_1719_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4907..5767)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDB5_MEISD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SCNpilot_expt_500_p_scaffold_1719_6
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(5764..6771)
DNA (1008bp) protein (336aa)
Uncharacterized protein id=3364361 bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
DMT(drug/metabolite transporter) superfamily permease
Tax=RBG_16_Chloroflexi_58_14_curated
SCNpilot_expt_500_p_scaffold_1719_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7014..7385)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GIX9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93328.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_p_scaffold_1719_8
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8219..8503
DNA (285bp) protein (95aa)
Cyclase/dehydrase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BJC4_MEISD
cyclase/dehydrase
Cyclase/dehydrase {ECO:0000313|EMBL:ADH65280.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
SCNpilot_expt_500_p_scaffold_1719_9
RLO_PLX_64_10, Bacteria

Not on your lists

8773..9378
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037C1AB4
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_expt_500_p_scaffold_1719_10
RLO_PLX_64_10, Bacteria

Not on your lists

9427..12672
DNA (3246bp) protein (1082aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000365A717 rbh
DNA directed RNA polymerase subunit beta
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_expt_500_p_scaffold_1719_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12931..13824)
DNA (894bp) protein (298aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZI3_9CHLR
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EFH81973.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1719_12
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(14034..15071)
DNA (1038bp) protein (346aa)
Twin-arginine translocation pathway signal n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8H0D9_DEIGI rbh
Twin-arginine translocation pathway signal; K10439 ribose transport system substrate-binding protein rbh
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:AFD27191.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
SCNpilot_expt_500_p_scaffold_1719_13
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(15507..16616)
DNA (1110bp) protein (370aa)
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8H0D8_DEIGI rbh
rbsC; Ribose/xylose/arabinose/galactoside ABC transporter permease; K10440 ribose transport system permease protein rbh
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component {ECO:0000313|EMBL:AFD27190.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
SCNpilot_expt_500_p_scaffold_1719_14
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(16613..17386)
DNA (774bp) protein (258aa)
ABC transporter, nucleotide binding/ATPase protein n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8H0D7_DEIGI rbh
frcA; ABC transporter nucleotide binding/ATPase; K10554 fructose transport system ATP-binding protein rbh
ABC transporter, nucleotide binding/ATPase protein {ECO:0000313|EMBL:AFD27189.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
SCNpilot_expt_500_p_scaffold_1719_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

18066..19244
DNA (1179bp) protein (393aa)
Transcriptional regulator, GntR family with LacI sensor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWS3_9CHLR
Transcriptional regulator, GntR family with LacI sensor {ECO:0000313|EMBL:EFH84656.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
GntR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_1719_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

19832..20653
DNA (822bp) protein (274aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZI3_9CHLR
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EFH81973.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1719_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

20689..21516
DNA (828bp) protein (276aa)
Alpha/beta hydrolase fold protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TSC2_9CHLR
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EFH83323.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
alpha/beta hydrolase fold protein
SCNpilot_expt_500_p_scaffold_1719_18
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(21712..22671)
DNA (960bp) protein (320aa)
Activator protein MtlR id=4475623 bin=GWF2_Planctomycete_41_51 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
AraC family transcriptional regulator
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCNpilot_expt_500_p_scaffold_1719_19
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22941..23855
DNA (915bp) protein (305aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EKJ2_RUNSL rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:KIF30401.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
phytanoyl-CoA dioxygenase rbh
SCNpilot_expt_500_p_scaffold_1719_20
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(24136..24435)
DNA (300bp) protein (100aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TW0_SOLUE
pyridoxal-dependent decarboxylase
Tax=BJP_08E140C01_Anaerolineales_40_8
Displaying 20 items

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