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SCNpilot_expt_500_p_scaffold_1868

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1868_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(2..499)
DNA (498bp) protein (166aa)
Transcriptional regulator, LysR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJ38_9CHLR
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFH89445.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
LysR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_1868_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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630..1196
DNA (567bp) protein (189aa)
Acetyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSM6_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:EIM26968.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
acetyltransferase
SCNpilot_expt_500_p_scaffold_1868_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(1267..1563)
DNA (297bp) protein (99aa)
Transglycosylase-associated protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5C3_9CHLR
Transglycosylase-associated protein {ECO:0000313|EMBL:EFH81703.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transglycosylase
SCNpilot_expt_500_p_scaffold_1868_4
unknown

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comp(1744..2610)
DNA (867bp) protein (289aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1868_5
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2883..3239
DNA (357bp) protein (119aa)
Lactoylglutathione lyase family protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XQN1_9PSEU
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:EHR60091.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_500_p_scaffold_1868_6
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3304..4539)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00034AB3B5 rbh
ROK family protein rbh
ROK family protein {ECO:0000313|EMBL:AFR10058.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
SCNpilot_expt_500_p_scaffold_1868_7
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4710..6857)
DNA (2148bp) protein (716aa)
glycoside hydrolase, clan GH-D; K07407 alpha-galactosidase [EC:3.2.1.22]
Alpha-galactosidase n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GCY8_9BACL
Alpha-galactosidase {ECO:0000313|EMBL:GAE07677.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
SCNpilot_expt_500_p_scaffold_1868_8
unknown

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comp(6899..7441)
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1868_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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8531..10327
DNA (1797bp) protein (599aa)
ABC transporter related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4F8_9CHLR rbh
ABC transporter related protein {ECO:0000313|EMBL:EFH81388.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
multidrug ABC transporter ATPase/permease rbh
SCNpilot_expt_500_p_scaffold_1868_10
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(10463..11272)
DNA (810bp) protein (270aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B8A6_HERA2
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ABX06459.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_expt_500_p_scaffold_1868_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11705..12451)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248C830
TPR repeat protein {ECO:0000313|EMBL:AKF07737.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
TPR repeat-containing protein
SCNpilot_expt_500_p_scaffold_1868_12
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12563..13477)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248C830
Uncharacterized protein {ECO:0000313|EMBL:KEQ25938.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1868_13
unknown

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13867..14160
DNA (294bp) protein (98aa)

This feature has no annotations

Displaying 13 items

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