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SCNpilot_expt_500_p_scaffold_6001

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_6001_1
unknown

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comp(235..1155)
DNA (921bp) protein (307aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6001_2
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(1243..2175)
DNA (933bp) protein (311aa)
Glycosyl transferase family 2 n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QV94_CHLT3
family 2 glycosyl transferase; K14597 chlorobactene glucosyltransferase
Tax=RBG_13_WOR_2_44_8_curated
SCNpilot_expt_500_p_scaffold_6001_3
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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comp(2430..3434)
DNA (1005bp) protein (335aa)
Cation efflux protein n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BGI4_DEHSV
Cation transporter {ECO:0000313|EMBL:AII59028.1}; TaxID=1432060 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi CG4.;"
cation efflux protein
SCNpilot_expt_500_p_scaffold_6001_4
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3560..3865)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YVF5_9EURY
branched-chain amino acid transport
Tax=BJP_IG2102_Desulfovibrionales_64_25
SCNpilot_expt_500_p_scaffold_6001_5
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3855..4571)
DNA (717bp) protein (239aa)
AzlC family protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JFB7_DESDE
AzlC family protein
AzlC family protein {ECO:0000313|EMBL:EGB13673.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
SCNpilot_expt_500_p_scaffold_6001_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(4776..6296)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TML1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH87011.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein; K09744 hypothetical protein
SCNpilot_expt_500_p_scaffold_6001_7
unknown

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comp(6280..6870)
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6001_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(6873..8372)
DNA (1500bp) protein (500aa)
Type III restriction protein res subunit n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TML3_9CHLR rbh
Type III restriction protein res subunit {ECO:0000313|EMBL:EFH87013.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
type III restriction protein res subunit rbh
SCNpilot_expt_500_p_scaffold_6001_9
Streptococcus downei, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8691..9200
DNA (510bp) protein (170aa)
Transcriptional regulator, MarR family n=1 Tax=Streptococcus downei F0415 RepID=E3CJS4_STRDO
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFQ57231.1}; TaxID=904293 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus downei F0415.;"
Multiple antibiotic resistance protein marR
SCNpilot_expt_500_p_scaffold_6001_10
unknown

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9293..9718
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6001_11
unknown

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9942..10496
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6001_12
unknown

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10790..11266
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_6001_13
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(11357..12547)
DNA (1191bp) protein (397aa)
aconitase; K01705 homoaconitate hydratase [EC:4.2.1.36] rbh
Aconitase A n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AIQ4_IGNAJ rbh
Aconitase A {ECO:0000313|EMBL:AFH48861.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Displaying 13 items

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