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SCNpilot_expt_500_p_scaffold_945

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_945_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

3..1955
DNA (1953bp) protein (651aa)
penicillin-binding protein 2 (EC:2.4.1.129); K05515 penicillin-binding protein 2 rbh
Penicillin-binding protein 2 {ECO:0000313|EMBL:ACZ39636.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACZ39636.1};; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Penicillin-binding protein 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6L1_SPHTD rbh
SCNpilot_expt_500_p_scaffold_945_2
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2503..3570
DNA (1068bp) protein (356aa)
High-affinity nickel transporter n=2 Tax=Pseudomonas RepID=J0PEL5_9PSED rbh
High-affinity nickel transport protein {ECO:0000313|EMBL:AJZ57646.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
high-affinity nickel transporter; K07241 high-affinity nickel-transport protein
SCNpilot_expt_500_p_scaffold_945_3
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(3781..4206)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIP1_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ43612.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_expt_500_p_scaffold_945_4
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(4422..5252)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0D2_ANATU
hypothetical protein
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_expt_500_p_scaffold_945_5
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5308..5523)
DNA (216bp) protein (72aa)
Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
SCNpilot_expt_500_p_scaffold_945_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5832..7004)
DNA (1173bp) protein (391aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
two-component sensor histidine kinase id=24489595 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
SCNpilot_expt_500_p_scaffold_945_7
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(7001..7705)
DNA (705bp) protein (235aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NF05_ROSCS
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABU58853.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_expt_500_p_scaffold_945_8
Paenibacillus sp. D9, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8291..9772
DNA (1482bp) protein (494aa)
Transporter n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NWW3_9SPHI
Transporter {ECO:0000313|EMBL:KKC46039.1}; TaxID=665792 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. D9.;"
EmrB/QacA family drug resistance transporter rbh
SCNpilot_expt_500_p_scaffold_945_9
unknown

Not on your lists

9904..10074
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_945_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10290..11108)
DNA (819bp) protein (273aa)
Alpha/beta hydrolase fold protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LT88_9RHIZ
alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_expt_500_p_scaffold_945_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(11249..11791)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI000363F52D
putative integral membrane protein
Tax=RBG_16_Chloroflexi_63_12_curated
SCNpilot_expt_500_p_scaffold_945_12
unknown

Not on your lists

comp(11796..12116)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_945_13
Lysinibacillus boronitolerans, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12521..13060
DNA (540bp) protein (180aa)
TetR family transcriptional regulator n=1 Tax=Lysinibacillus boronitolerans RepID=UPI00030DBF0F
TetR family transcriptional regulator {ECO:0000313|EMBL:KGR80883.1}; TaxID=1294264 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus boronitolerans JCM 21713 = 10a = NBRC 103108.;"
TetR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_945_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13470..13982)
DNA (513bp) protein (171aa)
Copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting n=1 Tax=Rhodanobacter denitrificans RepID=M4NDS0_9GAMM
copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting
Copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting {ECO:0000313|EMBL:AGG88884.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_945_15
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14685..15056
DNA (372bp) protein (124aa)
Regulatory protein ArsR n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLY3_DESK7
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEG14126.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
SCNpilot_expt_500_p_scaffold_945_16
unknown

Not on your lists

15209..15841
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_945_17
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16028..17158
DNA (1131bp) protein (377aa)
cation transporter n=1 Tax=Paenibacillus elgii RepID=UPI000248D682
Zinc transporter ZitB {ECO:0000313|EMBL:KEQ23597.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
cation diffusion facilitator family transporter
SCNpilot_expt_500_p_scaffold_945_18
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

17218..18003
DNA (786bp) protein (262aa)
Transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WWK7_9GAMM
Transporter {ECO:0000313|EMBL:AIZ45037.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
hypothetical protein; K07238 zinc transporter, ZIP family
SCNpilot_expt_500_p_scaffold_945_19

Not on your lists

18055..18591
DNA (537bp) protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA14578.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_p_scaffold_945_20

Not on your lists

18758..19384
DNA (627bp) protein (209aa)
Uncharacterized protein, copper resistance protein CopC-like protein n=1 Tax=Frankia sp. QA3 RepID=I8ZVY7_9ACTO
CopC domain protein {ECO:0000313|EMBL:AIA14759.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
copper resistance protein CopC; K07156
SCNpilot_expt_500_p_scaffold_945_21

Not on your lists

19610..20464
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYD0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:AIA14978.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_945_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

20479..22440
DNA (1962bp) protein (654aa)
Copper resistance protein CopC n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLB8_9CHLR rbh
Copper resistance protein CopC {ECO:0000313|EMBL:EFH86568.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
copper resistance protein CopC; K14166 copper transport protein
SCNpilot_expt_500_p_scaffold_945_23

Not on your lists

22529..22948
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA14978.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_p_scaffold_945_24
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

22948..24426
DNA (1479bp) protein (493aa)
Copper resistance protein CopC n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLB8_9CHLR
Copper resistance protein CopC {ECO:0000313|EMBL:EFH86568.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
copper resistance protein CopC; K14166 copper transport protein
Displaying 24 items

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