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SCNpilot_expt_500_p_scaffold_2024

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2024_1
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..1281
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036EB9FE
FAD-dependent oxygenase {ECO:0000313|EMBL:KJY40506.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
Mitomycin radical oxidase
SCNpilot_expt_500_p_scaffold_2024_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(1317..2603)
DNA (1287bp) protein (429aa)
Copper resistance protein CopC n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6K2_9CHLR
Copper resistance protein CopC {ECO:0000313|EMBL:EFH80613.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
copper resistance protein CopC; K14166 copper transport protein
SCNpilot_expt_500_p_scaffold_2024_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(2630..3943)
DNA (1314bp) protein (438aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6K1_9CHLR rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH80612.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
sugar phosphate permease rbh
SCNpilot_expt_500_p_scaffold_2024_4
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3963..4385)
DNA (423bp) protein (141aa)
Transcriptional regulator, MarR family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHD3_SYNFM
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABK16835.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
SCNpilot_expt_500_p_scaffold_2024_5
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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4714..5124
DNA (411bp) protein (137aa)
Ribosome-binding factor A n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=RBFA_THERP
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
Tax=BJP_08E140C01_Clostridiales_46_19
SCNpilot_expt_500_p_scaffold_2024_6
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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5128..6006
DNA (879bp) protein (293aa)
mtaP; methylthioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] rbh
S-methyl-5'-thioadenosine phosphorylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPH1_9CHLR rbh
Tax=CG_Dehalo_02
SCNpilot_expt_500_p_scaffold_2024_7
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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6049..6963
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TNX9_9CHLR
hypothetical protein
Tax=CG_Anaero_02
SCNpilot_expt_500_p_scaffold_2024_8
unknown

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7006..7905
DNA (900bp) protein (300aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2024_9
unknown

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7925..10789
DNA (2865bp) protein (955aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2024_10
GWB1_OP11_39_12, Woesebacteria, Microgenomates, Bacteria

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10825..13455
DNA (2631bp) protein (877aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR00345.1}; TaxID=1618574 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_12.;"
hypothetical protein id=3787 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
Displaying 10 items

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