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SCNpilot_expt_500_p_scaffold_2124

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2124_1
Lactobacillus fabifermentans, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2..1168
DNA (1167bp) protein (389aa)
beta-lactamase n=1 Tax=Lactobacillus animalis RepID=UPI000219496C
Beta-lactamase {ECO:0000313|EMBL:ETY73783.1}; TaxID=1400520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fabifermentans T30PCM01.;"
beta-lactamase
SCNpilot_expt_500_p_scaffold_2124_2
MPI_Anaerolineae_49_20, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(1459..1737)
DNA (279bp) protein (93aa)
30S ribosomal protein S20 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEM9_9FIRM
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
Tax=MPI_Anaerolineae_49_20
SCNpilot_expt_500_p_scaffold_2124_3
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1879..2514
DNA (636bp) protein (212aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Endoribonuclease YbeY n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVM0_RHOCS
hypothetical protein; K07042 probable rRNA maturation factor
SCNpilot_expt_500_p_scaffold_2124_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2545..2997
DNA (453bp) protein (151aa)
undecaprenol kinase (EC:2.7.1.66 2.7.1.107)
Diacylglycerol kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKQ5_9CHLR
Diacylglycerol kinase {ECO:0000313|EMBL:EFH86355.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_expt_500_p_scaffold_2124_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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3010..4245
DNA (1236bp) protein (412aa)
Putative glycosyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6Z4_CALAS rbh
putative glycosyltransferase rbh
Tax=RBG_16_Chloroflexi_63_12_curated
SCNpilot_expt_500_p_scaffold_2124_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(4437..4877)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2YQN5_9NOCA
hypothetical protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
SCNpilot_expt_500_p_scaffold_2124_7

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comp(4870..5337)
DNA (468bp) protein (156aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Methylosarcina fibrata RepID=UPI00036DB1DF
Uncharacterized protein {ECO:0000313|EMBL:KKN03732.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_500_p_scaffold_2124_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(5495..5890)
DNA (396bp) protein (132aa)
DoxX family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6F0_SPHTD
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ACZ39575.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_expt_500_p_scaffold_2124_9

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6169..6804
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N799_9CLOT
Helix-turn-helix domain protein {ECO:0000313|EMBL:AIA15696.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative ArsR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_2124_10
unknown

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6900..7097
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2124_11
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7236..7529
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FVF2_PSYA2
hypothetical protein; K06975
Uncharacterized protein {ECO:0000313|EMBL:AAZ18006.1}; TaxID=259536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter arcticus (strain DSM 17307 / 273-4).;"
SCNpilot_expt_500_p_scaffold_2124_12
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(7635..8906)
DNA (1272bp) protein (424aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
PAS fold family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W0J6_9CYAN
GAF sensor signal transduction histidine kinase
SCNpilot_expt_500_p_scaffold_2124_13
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(9149..10579)
DNA (1431bp) protein (477aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] rbh
AD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IH65_9CHLR rbh
AD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFO79540.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
SCNpilot_expt_500_p_scaffold_2124_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

11064..11990
DNA (927bp) protein (309aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TW71_9CHLR rbh
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:EFH84454.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PhzF family phenazine biosynthesis protein; K06998
SCNpilot_expt_500_p_scaffold_2124_15
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12075..12893
DNA (819bp) protein (273aa)
Transcriptional regulator, AraC family n=1 Tax=Paenibacillus lactis 154 RepID=G4HJ12_9BACL
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHB62730.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
AraC family transcriptional regulator
SCNpilot_expt_500_p_scaffold_2124_16
unknown

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comp(12912..12998)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 16 items

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