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SCNpilot_expt_500_p_scaffold_2133

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2133_1
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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1..414
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002E17D4D
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:AFY30801.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
SCNpilot_expt_500_p_scaffold_2133_2

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comp(411..1649)
DNA (1239bp) protein (413aa)
Transporter, major facilitator family protein (Fragment) n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WYZ5_ANEAE rbh
Major Facilitator Superfamily {ECO:0000313|EMBL:AIA14686.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
major facilitator superfamily protein; K03449 MFS transporter, CP family, cyanate transporter rbh
SCNpilot_expt_500_p_scaffold_2133_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1794..2177)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FU33_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI93663.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_500_p_scaffold_2133_4
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2376..2744
DNA (369bp) protein (123aa)
GntR family transcriptional regulator n=1 Tax=Paenibacillus elgii RepID=UPI000248C82B
GntR family transcriptional regulator {ECO:0000313|EMBL:KEQ26168.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
GntR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_2133_5
Paenibacillus sp. IHBB 10380, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2744..3631
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI00036E2B69 rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:AJS60557.1}; TaxID=1566358 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHBB 10380.;"
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein rbh
SCNpilot_expt_500_p_scaffold_2133_6
Paenibacillus sp. FSL R5-0345, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3636..4334
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002E9CEC7
Uncharacterized protein {ECO:0000313|EMBL:AIQ35091.1}; TaxID=1536770 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0345.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2133_7
unknown

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comp(4352..4939)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2133_8
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5168..6697)
DNA (1530bp) protein (510aa)
glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Glycerol kinase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SH83_THEM7
SCNpilot_expt_500_p_scaffold_2133_9
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6744..8339)
DNA (1596bp) protein (532aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] rbh
FAD dependent oxidoreductase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E6Z5_GEOLS rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACD96400.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
SCNpilot_expt_500_p_scaffold_2133_10
Thermobaculum terrenum, Thermobaculum, Bacteria

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8769..10418
DNA (1650bp) protein (550aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEZ6_THET1 rbh
oxidoreductase molybdopterin binding protein rbh
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ACZ41502.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_expt_500_p_scaffold_2133_11
unknown

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10632..10943
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2133_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(11173..12288)
DNA (1116bp) protein (372aa)
Ribosome-binding ATPase YchF n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C700_SPHTD rbh
GTP-binding protein YchF; K06942 rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_expt_500_p_scaffold_2133_13
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(12358..12936)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SJS0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN16376.1}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter sp. AbM4.;"
Displaying 13 items

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