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SCNpilot_expt_500_p_scaffold_2139

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2139_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..384
DNA (384bp) protein (128aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:CDM65054.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CDM65054.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
[2Fe-2S] binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
[2Fe-2S] binding domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1E7_THERP
SCNpilot_expt_500_p_scaffold_2139_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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475..2880
DNA (2406bp) protein (802aa)
Oxidoreductase, large chain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1E8_THERP rbh
oxidoreductase, large chain rbh
Oxidoreductase, large chain {ECO:0000313|EMBL:ACM05168.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_expt_500_p_scaffold_2139_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2953..3810
DNA (858bp) protein (286aa)
molybdopterin dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THP3_9CHLR
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:EFH89048.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_expt_500_p_scaffold_2139_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(3959..4315)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMP7_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF85960.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
SCNpilot_expt_500_p_scaffold_2139_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

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comp(4845..5804)
DNA (960bp) protein (320aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] rbh
Malate dehydrogenase id=3986853 bin=GWA2_Methylomirabilis_73_35 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
SCNpilot_expt_500_p_scaffold_2139_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(5998..6843)
DNA (846bp) protein (282aa)
Regulatory protein RecX n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQF5_9CHLR
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
regulatory protein RecX; K03565 regulatory protein
SCNpilot_expt_500_p_scaffold_2139_7
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7117..7494)
DNA (378bp) protein (126aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Arthrobacter sp. SJCon RepID=L8TV26_9MICC
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ELT45650.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
SCNpilot_expt_500_p_scaffold_2139_8
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(7776..8927)
DNA (1152bp) protein (384aa)
recA protein (EC:3.6.3.8); K03553 recombination protein RecA rbh
Protein RecA n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDJ0_THET1 rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_expt_500_p_scaffold_2139_9
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(9115..9945)
DNA (831bp) protein (277aa)
Response regulator receiver protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFK0_THET1
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACZ41706.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_expt_500_p_scaffold_2139_10
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(10094..10642)
DNA (549bp) protein (183aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFK1_THET1
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACZ41707.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_expt_500_p_scaffold_2139_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(10649..11482)
DNA (834bp) protein (278aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2T4_SPHTD
two component, sigma54 specific, transcriptional regulator, Fis family
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACZ38551.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_expt_500_p_scaffold_2139_12
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(11701..12912)
DNA (1212bp) protein (404aa)
ABC transporter-like protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B4W6_HERA2
ABC transporter related {ECO:0000313|EMBL:ABX05689.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Displaying 12 items

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