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SCNpilot_expt_500_p_scaffold_2304

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2304_1
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(2..1189)
DNA (1188bp) protein (396aa)
Dihydrolipoyl dehydrogenase n=1 Tax=uncultured bacterium RepID=K2D5L9_9BACT
dihydrolipoamide dehydrogenase
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_expt_500_p_scaffold_2304_2
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2415..3500
DNA (1086bp) protein (362aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VM08_9CYAN
Phycocyanin alpha phycocyanobilin lyase {ECO:0000313|EMBL:AKB25876.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
PBS lyase HEAT domain protein repeat-containing protein
SCNpilot_expt_500_p_scaffold_2304_3
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3645..4010
DNA (366bp) protein (122aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A id=4729803 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWC2_Pelobacteraceae_58_13_curated
SCNpilot_expt_500_p_scaffold_2304_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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4013..4612
DNA (600bp) protein (200aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
nqo; NADH-quinone oxidoreductase subunit 6 (NADH dehydrogenase I chain 6) (NDH-1 subunit 6) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQN0_9CHLR
SCNpilot_expt_500_p_scaffold_2304_5
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4584..5156
DNA (573bp) protein (191aa)
NADH/F420H2 dehydrogenase, subunit C (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
NADH-quinone oxidoreductase subunit C n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZF67_TERRK
SCNpilot_expt_500_p_scaffold_2304_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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5166..6425
DNA (1260bp) protein (420aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
NADH dehydrogenase I subunit D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit D n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQN2_9CHLR rbh
SCNpilot_expt_500_p_scaffold_2304_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6427..6969
DNA (543bp) protein (181aa)
nuoE; NADH dehydrogenase (ubiquinone) chain E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH dehydrogenase I subunit E id=3272603 bin=GWC2_Deltaproteobacteria_66_88 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Tax=GWA2_Deltaproteobacteria_65_63_curated
SCNpilot_expt_500_p_scaffold_2304_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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6986..8341
DNA (1356bp) protein (452aa)
NADH-quinone oxidoreductase, F subunit {ECO:0000313|EMBL:EFH87701.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EFH87701.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
NADH dehydrogenase subunit F (EC:1.6.5.3); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase, F subunit n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQN4_9CHLR rbh
SCNpilot_expt_500_p_scaffold_2304_9
unknown

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comp(8522..8758)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2304_10
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(8857..9666)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00030D180C
transcriptional regulator, effector-binding domain/component
Transcriptional regulator, effector-binding domain/component {ECO:0000313|EMBL:AFY45989.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
SCNpilot_expt_500_p_scaffold_2304_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(9931..11244)
DNA (1314bp) protein (438aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAD3_SPHTD
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACZ40776.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_expt_500_p_scaffold_2304_12
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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11942..12274
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3E4_CALAS
hypothetical protein; K06888
Uncharacterized protein {ECO:0000313|EMBL:BAL99781.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Displaying 12 items

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