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SCNpilot_expt_500_p_scaffold_2477

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2477_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3..2051)
DNA (2049bp) protein (683aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THP2_9CHLR
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:EFH89047.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
carbon monoxide dehydrogenase
SCNpilot_expt_500_p_scaffold_2477_2
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2351..3382
DNA (1032bp) protein (344aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] rbh
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6W9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHB92608.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
SCNpilot_expt_500_p_scaffold_2477_3
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3435..4082
DNA (648bp) protein (216aa)
sugar isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
Sugar isomerase (SIS) n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A258_MAHA5
Phosphoheptose isomerase {ECO:0000313|EMBL:KIL38345.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
SCNpilot_expt_500_p_scaffold_2477_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4305..4979)
DNA (675bp) protein (225aa)
Asp/Glu/hydantoin racemase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKK3_9SPHI
Asp/Glu/hydantoin racemase
Asp/Glu/hydantoin racemase {ECO:0000313|EMBL:AHF16885.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_500_p_scaffold_2477_5
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5163..6515)
DNA (1353bp) protein (451aa)
Type III effector Hrp-dependent protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G889_9BURK rbh
Type III effector Hrp-dependent protein {ECO:0000313|EMBL:EDT07588.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
type III effector Hrp-dependent protein rbh
SCNpilot_expt_500_p_scaffold_2477_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6512..7777)
DNA (1266bp) protein (422aa)
RuBisCO-like protein; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] rbh
ribulose bisphosphate carboxylase n=1 Tax=Halomonas lutea RepID=UPI00037A97B1 rbh
Ribulose bisphosphate carboxylase {ECO:0000313|EMBL:KJB96270.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCNpilot_expt_500_p_scaffold_2477_7
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(7806..9773)
DNA (1968bp) protein (656aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEM9_9SPHI
hypothetical protein; K09955 hypothetical protein
Tax=RBG_13_Planctomycetes_46_10_curated
SCNpilot_expt_500_p_scaffold_2477_8
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(9809..11692)
DNA (1884bp) protein (628aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Putative beta-galactosidase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0M6_CALAS
putative beta-galactosidase
Displaying 8 items

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