ggKbase home page

SCNpilot_expt_500_p_scaffold_3100

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3100_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(1..486)
DNA (486bp) protein (162aa)
N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C735_SPHTD
N-acetylmuramoyl-L-alanine amidase family 2 protein
N-acetylmuramoyl-L-alanine amidase family 2 {ECO:0000313|EMBL:ACZ37796.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_expt_500_p_scaffold_3100_2
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(709..1218)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNW4_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU59258.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_expt_500_p_scaffold_3100_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1311..2405)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E0DDA
histone deacetylase; K04768 acetoin utilization protein AcuC
Tax=RBG_16_Bathyarchaeota_48_13_curated
SCNpilot_expt_500_p_scaffold_3100_4
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2578..4380)
DNA (1803bp) protein (601aa)
oligoendopeptidase; K08602 oligoendopeptidase F [EC:3.4.24.-] rbh
Oligoendopeptidase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RH1_SYMTH rbh
Oligoendopeptidase {ECO:0000313|EMBL:BAD39722.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
SCNpilot_expt_500_p_scaffold_3100_5
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(4647..6614)
DNA (1968bp) protein (656aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IAU1_9CHLR rbh
Uncharacterized protein {ECO:0000313|EMBL:EFO81697.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_3100_6
unknown

Not on your lists

comp(6756..6908)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3100_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7191..7775
DNA (585bp) protein (195aa)
RNA polymerase sigma factor n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBE7_STRRD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_500_p_scaffold_3100_8
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7772..9574
DNA (1803bp) protein (601aa)
WD40 repeat-containing protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QMP1_NOSS7
WD40 repeat-containing protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AFY46334.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
SCNpilot_expt_500_p_scaffold_3100_9

Not on your lists

9727..10113
DNA (387bp) protein (129aa)
EST1 n=1 Tax=uncultured microorganism RepID=E5G9H4_9ZZZZ
EST1 {ECO:0000313|EMBL:ADR31550.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
lipase/esterase
Displaying 9 items

View Taxonomy