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SCNpilot_expt_500_p_scaffold_3424

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3424_1
unknown

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3..1307
DNA (1305bp) protein (435aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3424_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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1309..2694
DNA (1386bp) protein (462aa)
Putative ABC-type branched-chain amino acid transport systems, periplasmic binding component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJR4_9CHLR
Putative ABC-type branched-chain amino acid transport systems, periplasmic binding component {ECO:0000313|EMBL:CCF84926.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_500_p_scaffold_3424_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2856..3743)
DNA (888bp) protein (296aa)
Putative esterase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGK3_9BACT rbh
Putative esterase {ECO:0000313|EMBL:EEF61054.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
esterase; K07214 enterochelin esterase and related enzymes rbh
SCNpilot_expt_500_p_scaffold_3424_4
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(3822..4331)
DNA (510bp) protein (170aa)
MgtC/SapB transporter n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEN4_THET1
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
MgtC/SapB transporter {ECO:0000313|EMBL:ACZ41390.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_expt_500_p_scaffold_3424_5
RIFOXYD1_FULL_WWE3_39_9_curated, WWE3, Bacteria

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5036..5959
DNA (924bp) protein (308aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=uncultured bacterium RepID=K2B997_9BACT
hypothetical protein
Tax=RIFOXYD1_FULL_WWE3_39_9_curated
SCNpilot_expt_500_p_scaffold_3424_6
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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5963..7474
DNA (1512bp) protein (504aa)
Gll1781 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NJQ1_GLOVI
polysaccharide transporter
Gll1781 protein {ECO:0000313|EMBL:BAC89722.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
SCNpilot_expt_500_p_scaffold_3424_7
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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comp(7604..8761)
DNA (1158bp) protein (386aa)
TDP-4-keto-6-deoxy-D-glucose transaminase n=1 Tax=Moorea producens 3L RepID=F4XX27_9CYAN
TDP-4-keto-6-deoxy-D-glucose transaminase
Tax=RBG_16_Chloroflexi_52_11_curated
SCNpilot_expt_500_p_scaffold_3424_8
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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9184..10107
DNA (924bp) protein (308aa)
copper/zinc binding superoxide dismutase; K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
Cu/Zn superoxide dismutase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV62_9BACT
Cu/Zn superoxide dismutase {ECO:0000313|EMBL:BAL59491.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
SCNpilot_expt_500_p_scaffold_3424_9
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10681..11889
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036E85DD rbh
ABC-type xylose transport system periplasmic component-like protein rbh
ABC-type xylose transport system periplasmic component-like protein {ECO:0000313|EMBL:AFZ33374.1}; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
SCNpilot_expt_500_p_scaffold_3424_10
Leptolyngbya boryana, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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12027..12830
DNA (804bp) protein (268aa)
Putative ABC transport protein n=1 Tax=Leptolyngbya boryana RepID=Q9AM09_LEPBY rbh
Putative ABC transport protein {ECO:0000313|EMBL:AAK01295.1}; TaxID=1184 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya boryana (Plectonema boryanum).;"
ABC transporter
SCNpilot_expt_500_p_scaffold_3424_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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12845..14110
DNA (1266bp) protein (422aa)
Inner-membrane translocator n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TI55_9CHLR rbh
Inner-membrane translocator {ECO:0000313|EMBL:EFH89112.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
inner-membrane translocator; K10544 D-xylose transport system permease protein
Displaying 11 items

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