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SCNpilot_expt_500_p_scaffold_3845

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3845_1
unknown

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2..244
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3845_2
unknown

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comp(388..567)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3845_3
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(847..2295)
DNA (1449bp) protein (483aa)
Helix-turn-helix domain protein n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T5I5_THEIA
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADD03358.1}; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter italicus (strain DSM 9252 / Ab9).;"
SCNpilot_expt_500_p_scaffold_3845_4
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(2740..3954)
DNA (1215bp) protein (405aa)
Acyltransferase 3 n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QCJ9_9NOSO
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:AFY42557.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
SCNpilot_expt_500_p_scaffold_3845_5
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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4252..5238
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQ59_ROSCS rbh
Tax=RBG_16_Planctomycetes_43_13_curated
SCNpilot_expt_500_p_scaffold_3845_6
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(5239..5856)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00035D83D2
deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ABX04725.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_expt_500_p_scaffold_3845_7
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6180..6767
DNA (588bp) protein (196aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLW3_SIDLE
bifunctional deaminase-reductase domain protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADE12558.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
SCNpilot_expt_500_p_scaffold_3845_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(6792..7379)
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVA7_9CHLR
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH84207.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
TetR family transcriptional regulator putative
SCNpilot_expt_500_p_scaffold_3845_9
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7558..7983
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000367F357
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ADZ79133.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_p_scaffold_3845_10
unknown

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8032..8451
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3845_11
unknown

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comp(8595..8744)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 11 items

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