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SCNpilot_expt_500_p_scaffold_667_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_667_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..944
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Bacillus macauensis ZFHKF-1 RepID=I8IXE0_9BACI
Uncharacterized protein {ECO:0000313|EMBL:AIL13841.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_667_curated_2
Rickettsia endosymbiont of Ixodes scapularis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1108..2112
DNA (1005bp) protein (335aa)
Transposase n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YZQ2_9RICK
Transposase {ECO:0000313|EMBL:EER20786.1}; TaxID=444612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.;" source="Rickettsia endosymbiont of Ixodes scapularis.;"
transposase
SCNpilot_expt_500_p_scaffold_667_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2489..4609
DNA (2121bp) protein (707aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12323.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_667_curated_4
unknown

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4584..5069
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_667_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5076..5468)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=2 Tax=Rickettsia bellii RepID=A8GWC9_RICB8
Uncharacterized protein {ECO:0000313|EMBL:AIL13723.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_667_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5461..5706)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=2 Tax=Rickettsia bellii RepID=A8GWD0_RICB8
Uncharacterized protein {ECO:0000313|EMBL:AIL13722.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_667_curated_7
Piscirickettsia salmonis, Piscirickettsia, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5997..6578
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXI7_9BRAD
Phage integrase family protein {ECO:0000313|EMBL:KGP94751.1}; TaxID=1238 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Piscirickettsia.;" source="Piscirickettsia salmonis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_667_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6684..7802)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERE7_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05799.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_expt_500_p_scaffold_667_curated_9
unknown

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comp(7877..8407)
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_667_curated_10
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8629..9504)
DNA (876bp) protein (292aa)
Putative transcriptional regulator n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GX94_RICB8
transcriptional regulator
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KJV92211.1}; TaxID=1359194 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.;" source="Rickettsia bellii str. RML Mogi.;"
SCNpilot_expt_500_p_scaffold_667_curated_11
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9736..10455
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI00037A1170
Uncharacterized protein {ECO:0000313|EMBL:ETO92013.1}; TaxID=1274403 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis RV-2-2007.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_667_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10929..11282
DNA (354bp) protein (118aa)
transposase IS4 family protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BB44
Uncharacterized protein {ECO:0000313|EMBL:AIL13890.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Transposase of ISAli17, IS5 family, subgroup IS903
SCNpilot_expt_500_p_scaffold_667_curated_13
unknown

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11527..12117
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_667_curated_14
Coffea canephora, Coffea, Gentianales, asterids, Streptophyta, Viridiplantae

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comp(12461..13261)
DNA (801bp) protein (267aa)
Predicted protein n=1 Tax=Naegleria gruberi RepID=D2W1Y4_NAEGR
Coffea canephora DH200=94 genomic scaffold, scaffold_45 {ECO:0000313|EMBL:CDP10490.1}; TaxID=49390 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea.;" source="Coffea canephora (Robusta coffee).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_667_curated_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13362..14069)
DNA (708bp) protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13139.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_667_curated_16
unknown

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14525..14878
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_667_curated_17
unknown

Not on your lists

15207..15737
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_667_curated_18

Not on your lists

comp(16240..20028)
DNA (3789bp) protein (1263aa)
TPR protein n=1 Tax=uncultured bacterium RepID=K2EJK9_9BACT
TPR protein {ECO:0000313|EMBL:EKE10418.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_667_curated_19
unknown

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comp(20909..21202)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_667_curated_20
unknown

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comp(21271..21513)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_667_curated_21

Not on your lists

21909..22352
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DX36_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10416.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_p_scaffold_667_curated_22

Not on your lists

22372..24096
DNA (1725bp) protein (575aa)
Sensor protein n=1 Tax=uncultured bacterium RepID=K2ELI4_9BACT
Sensor protein {ECO:0000313|EMBL:EKE10417.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_p_scaffold_667_curated_23

Not on your lists

comp(24846..27884)
DNA (3039bp) protein (1013aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZLK4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD45283.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_667_curated_24
unknown

Not on your lists

28125..28358
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_667_curated_25
unknown

Not on your lists

28355..28855
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_667_curated_26
Dictyostelium purpureum, Dictyostelium, Dictyosteliida, Eukaryota

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28889..31282
DNA (2394bp) protein (798aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0ZHY3_DICPU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC36449.1}; TaxID=5786 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium purpureum (Slime mold).;"
SCNpilot_expt_500_p_scaffold_667_curated_27
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31292..31735)
DNA (444bp) protein (148aa)
Transposase IS4 family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYA3_9GAMM
Transposase IS4 family protein {ECO:0000313|EMBL:EIJ36346.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_667_curated_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32012..33346
DNA (1335bp) protein (445aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12323.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Displaying 28 items

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