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SCNpilot_expt_500_p_scaffold_992_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_992_curated_1
unknown

Not on your lists

185..586
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_992_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1433..6301
DNA (4869bp) protein (1623aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXJ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12762.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
gdhB; NAD-specific glutamate dehydrogenase
SCNpilot_expt_500_p_scaffold_992_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6264..7193)
DNA (930bp) protein (310aa)
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1F7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL12763.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_992_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7201..8322)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000371AE7A
Uncharacterized protein {ECO:0000313|EMBL:AIL12764.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative enzyme of heme biosynthesis (HemY-like); K02498 HemY protein
SCNpilot_expt_500_p_scaffold_992_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8324..8938)
DNA (615bp) protein (205aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12765.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_992_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8938..9705)
DNA (768bp) protein (256aa)
uroporphyrinogen III synthase HEM4 (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U3E8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL12766.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_992_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9756..10706
DNA (951bp) protein (317aa)
ADP-heptose of LPS heptosyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUG0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL12767.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ADP-heptose of LPS heptosyltransferase
SCNpilot_expt_500_p_scaffold_992_curated_8
unknown

Not on your lists

comp(10711..11613)
DNA (903bp) protein (301aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_992_curated_9
unknown

Not on your lists

comp(11651..12481)
DNA (831bp) protein (277aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_992_curated_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12594..13052)
DNA (459bp) protein (153aa)
MarR family transcriptional regulator {ECO:0000313|EMBL:AIL12768.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Transcriptional regulator, MarR family id=3710681 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
transcriptional regulator, MarR family
SCNpilot_expt_500_p_scaffold_992_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13202..14548)
DNA (1347bp) protein (449aa)
Na+/H+ antiporter n=1 Tax=uncultured bacterium RepID=K2DTL6_9BACT
Sodium:proton antiporter {ECO:0000313|EMBL:AIL12769.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative Na+/H+ antiporter
SCNpilot_expt_500_p_scaffold_992_curated_12
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14545..15093)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=2 Tax=Rickettsia bellii RepID=A8GX03_RICB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE04543.1}; TaxID=336407 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.;" source="Rickettsia bellii (strain RML369-C).;"
SCNpilot_expt_500_p_scaffold_992_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15084..15317)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003670DF1
Uncharacterized protein {ECO:0000313|EMBL:AIL12770.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_992_curated_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15321..15797)
DNA (477bp) protein (159aa)
Transcriptional repressor NrdR n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMP8_AZOBR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
nrdR; transcriptional regulator (repressor) NrdR
SCNpilot_expt_500_p_scaffold_992_curated_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15797..17059)
DNA (1263bp) protein (421aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
serine hydroxymethyltransferase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AED9
SCNpilot_expt_500_p_scaffold_992_curated_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17622..18125
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EUH3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12773.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K09985 hypothetical protein
SCNpilot_expt_500_p_scaffold_992_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18254..18793
DNA (540bp) protein (180aa)
BioY n=7 Tax=Rickettsia rickettsii RepID=B0BXS6_RICRO
Uncharacterized protein {ECO:0000313|EMBL:AIL12774.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
BioY family protein; K03523 putative biotin biosynthesis protein BioY
SCNpilot_expt_500_p_scaffold_992_curated_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18797..19210
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12775.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Soluble lytic murein transglycosylase id=3150959 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein; K09706 hypothetical protein
SCNpilot_expt_500_p_scaffold_992_curated_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19238..19594)
DNA (357bp) protein (119aa)
MutT/nudix family protein n=1 Tax=Holospora undulata RepID=UPI00032DE488
DNA mismatch repair protein MutT {ECO:0000313|EMBL:AIL12776.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
MutT/nudix family protein
SCNpilot_expt_500_p_scaffold_992_curated_20
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19919..20464
DNA (546bp) protein (182aa)
50S ribosomal protein L21 n=2 Tax=Mesorhizobium sp. (strain BNC1) RepID=RL21_MESSB
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
SCNpilot_expt_500_p_scaffold_992_curated_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20475..20729
DNA (255bp) protein (85aa)
50S ribosomal protein L27 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LHG7_9PROT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
SCNpilot_expt_500_p_scaffold_992_curated_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20800..21810
DNA (1011bp) protein (337aa)
GTPase Obg n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUN1_AFIFE
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
obg; GTPase Obg; K03979 GTP-binding protein
SCNpilot_expt_500_p_scaffold_992_curated_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21882..22274
DNA (393bp) protein (131aa)
Ribosomal silencing factor RsfS n=1 Tax=alpha proteobacterium RS24 RepID=U2XMT2_9PROT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
iojap family protein; K09710 ribosome-associated protein
SCNpilot_expt_500_p_scaffold_992_curated_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22281..22574
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12780.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_992_curated_25
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22646..23191
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034A5BD9
RDD domain-containing protein
Tax=RBG_13_Ignavibacteria_36_8_curated
SCNpilot_expt_500_p_scaffold_992_curated_26
Rickettsiella grylli, Rickettsiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23652..24581
DNA (930bp) protein (310aa)
Microcin C7 self-immunity protein n=1 Tax=Rickettsiella grylli RepID=A8PPC2_9COXI
Microcin C7 self-immunity protein {ECO:0000313|EMBL:EDP46311.1}; TaxID=59196 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Rickettsiella.;" source="Rickettsiella grylli.;"
mccF; microcin C7 self-immunity protein
SCNpilot_expt_500_p_scaffold_992_curated_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24607..25104)
DNA (498bp) protein (166aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ogt; methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Pantoea RepID=UPI000255482E
SCNpilot_expt_500_p_scaffold_992_curated_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25269..25775)
DNA (507bp) protein (169aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
dinucleoside polyphosphate hydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
RNA pyrophosphohydrolase n=2 Tax=Rickettsia bellii RepID=RPPH_RICB8
SCNpilot_expt_500_p_scaffold_992_curated_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25808..27193)
DNA (1386bp) protein (462aa)
Carboxyl-terminal protease (EC:3.4.21.102)
Uncharacterized protein {ECO:0000313|EMBL:AIL12783.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Peptidase family protein id=2555638 bin=GWC2_Alphaproteobacteria_42_16 species=Micavibrio aeruginosavorus genus=Micavibrio taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_992_curated_30
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27253..28794)
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acan
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglyceromutase id=2555627 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Displaying items 1-30 of 40 in total

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