name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_673_curated_1
unknown
|
Not on your lists |
comp(274..510)
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_673_curated_2
unknown
|
Not on your lists |
comp(684..1994)
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_673_curated_3
unknown
|
Not on your lists |
comp(2381..3628)
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_673_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3805..4554
|
transcriptional regulator n=1 Tax=Acetobacter aceti RepID=UPI00022607A4
Probable transcriptional regulatory protein IM40_06725 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_673_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4574..5071
|
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=uncultured bacterium RepID=K2EI94_9BACT
|
|
SCNpilot_expt_500_p_scaffold_673_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5068..5676
|
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=uncultured bacterium RepID=K2EGI7_9BACT
ruvA; Holliday junction DNA helicase RuvA
|
|
SCNpilot_expt_500_p_scaffold_673_curated_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5680..6672
|
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003732693
ruvB; Holliday junction DNA helicase ruvB
|
|
SCNpilot_expt_500_p_scaffold_673_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6709..7839)
|
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LJV6_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:AIL13253.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_673_curated_9
unknown
|
Not on your lists |
8194..8430
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_673_curated_10
unknown
|
Not on your lists |
8634..9623
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_673_curated_11
unknown
|
Not on your lists |
9623..10114
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_673_curated_12
unknown
|
Not on your lists |
10816..11055
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_673_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11399..13021
|
Dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J635_9PROT
Electron transfer flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:AIL13251.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative electron transfer flavoprotein-ubiquinone oxidoreductase
|
|
SCNpilot_expt_500_p_scaffold_673_curated_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13052..13858
|
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
dapB; dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CEB2_9RHOB
|
|
SCNpilot_expt_500_p_scaffold_673_curated_15
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13878..14660
|
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
RNA methyltransferase, TrmH family, group 1; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-]
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISG6_RHOCS
|
|
SCNpilot_expt_500_p_scaffold_673_curated_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14789..15403
|
30S ribosomal protein S4 n=3 Tax=Acidiphilium RepID=RS4_ACICJ
rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
|
|
SCNpilot_expt_500_p_scaffold_673_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15490..16074
|
Uncharacterized protein n=5 Tax=Legionella pneumophila RepID=Q5X184_LEGPA
Uncharacterized protein {ECO:0000313|EMBL:AIL13248.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_673_curated_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16294..17214
|
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANK2_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIL13247.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
conserved membrane protein of unknown function
|
|
SCNpilot_expt_500_p_scaffold_673_curated_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17216..18661
|
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B67C1B
|
|
SCNpilot_expt_500_p_scaffold_673_curated_20
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18665..19996
|
AarF domain-containing kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JF13_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIL13245.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ABC1 family protein
|
|
SCNpilot_expt_500_p_scaffold_673_curated_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20026..20592)
|
Uncharacterized protein {ECO:0000313|EMBL:AIL13244.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
|
|
SCNpilot_expt_500_p_scaffold_673_curated_22
unknown
|
Not on your lists |
20720..22708
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_673_curated_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22753..24273)
|
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI0003637741
ATPase AAA {ECO:0000313|EMBL:AIL13243.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
tlcA-A; ADP,ATP carrier protein 1; K03301 ATP:ADP antiporter, AAA family
|
|
SCNpilot_expt_500_p_scaffold_673_curated_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24494..25258)
|
Chemotaxis protein CheY {ECO:0000313|EMBL:AIL13242.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Two-component response regulator id=4937313 bin=GWC2_Alphaproteobacteria_42_16 species=Micavibrio aeruginosavorus genus=Micavibrio taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
ctrA; two-component cell cycle transcriptional regulator ctrA
|
|
SCNpilot_expt_500_p_scaffold_673_curated_25
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25428..26216)
|
Tol-pal system protein YbgF, putative n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IX64_POLGS
Uncharacterized protein {ECO:0000313|EMBL:EWY38944.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Tol-pal system protein YbgF
|
|
SCNpilot_expt_500_p_scaffold_673_curated_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26301..26945
|
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Endonuclease III n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AG25_AZOBR
nth; DNA-(apurinic or apyrimidinic site) lyase
|
|
SCNpilot_expt_500_p_scaffold_673_curated_27
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26949..27503)
|
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FN76_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG39814.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_673_curated_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27503..27982)
|
Uncharacterized protein {ECO:0000313|EMBL:AIL13239.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ABC transporter substrate binding protein, putative id=4794836 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative ABC transporter involved in resistance to organic solvents, periplasmic component
|
|
SCNpilot_expt_500_p_scaffold_673_curated_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28022..29293)
|
Uncharacterized protein {ECO:0000313|EMBL:AIL13238.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
|
|
SCNpilot_expt_500_p_scaffold_673_curated_30
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29473..29823)
|
NADH:ubiquinone oxidoreductase subunit, putative {ECO:0000313|EMBL:ACI98351.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ACI98351.1};; EC=1.6.99.3 {ECO:0000313|EMBL:ACI98351.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
NADH:ubiquinone oxidoreductase subunit, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISB5_RHOCS
|