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SCNpilot_expt_500_p_scaffold_1219_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1219_curated_1
unknown

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356..676
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1219_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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905..2410
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESV3_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:AIL12564.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1219_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3091..3783)
DNA (693bp) protein (231aa)
MORN repeat protein n=1 Tax=Fusobacterium periodonticum ATCC 33693 RepID=D4CW70_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:AIL13566.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1219_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3799..6780)
DNA (2982bp) protein (994aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13567.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein COdytL_07981 id=4799234 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Rhs element Vgr protein
SCNpilot_expt_500_p_scaffold_1219_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6870..7205)
DNA (336bp) protein (112aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Zymomonas mobilis subsp. pomaceae (strain ATCC 29192 / JCM 10191 / NBRC 13757 / NCIMB 11200 / NRRL B-4491) RepID=F8ESS1_ZYMMT
Ferredoxin {ECO:0000313|EMBL:AIL13568.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K05524 ferredoxin
SCNpilot_expt_500_p_scaffold_1219_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7215..8000)
DNA (786bp) protein (262aa)
Asp/Glu/hydantoin racemase; K01779 aspartate racemase [EC:5.1.1.13]
Asp/Glu/hydantoin racemase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R5K2_SPISS
Uncharacterized protein {ECO:0000313|EMBL:AIL13569.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1219_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8116..8985
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036E250C
Uncharacterized protein {ECO:0000313|EMBL:AIL13570.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative sugar phosphatase (HAD superfamily)
SCNpilot_expt_500_p_scaffold_1219_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8987..9793)
DNA (807bp) protein (269aa)
Inositol monophosphatase {ECO:0000313|EMBL:AIL13571.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Inositol monophosphatase id=4908714 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
suhB; inositol monophosphatase
SCNpilot_expt_500_p_scaffold_1219_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9796..10362)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=uncultured bacterium RepID=K2DVT0_9BACT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
elongation factor P
SCNpilot_expt_500_p_scaffold_1219_curated_10
unknown

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comp(10592..11575)
DNA (984bp) protein (328aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1219_curated_11
unknown

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comp(12014..13726)
DNA (1713bp) protein (571aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1219_curated_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13917..14786)
DNA (870bp) protein (290aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148, ECO:0000313|EMBL:KJB92004.1}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative peptidyl-prolyl isomerase (PpiC-like); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGW6_9BACT
SCNpilot_expt_500_p_scaffold_1219_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14969..17770
DNA (2802bp) protein (934aa)
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Protein translocase subunit SecA id=4886480 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
SCNpilot_expt_500_p_scaffold_1219_curated_14
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(17767..18636)
DNA (870bp) protein (290aa)
Beta-lactamase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2B3_MYXSD
beta-lactamase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
SCNpilot_expt_500_p_scaffold_1219_curated_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18744..18995)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13575.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Displaying 15 items

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