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SCNpilot_expt_500_p_scaffold_724_curated_27

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(30352..31032)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 226.0
  • Bit_score: 384
  • Evalue 1.30e-103
Ribosomal RNA large subunit methyltransferase E n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U233_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 211.0
  • Bit_score: 265
  • Evalue 6.30e-68
ftsJ; ribosomal RNA large subunit (23S) methyltransferase similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 217.0
  • Bit_score: 256
  • Evalue 9.20e-66

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGTCTTCAATTAAGCATACAGTCAGGGCTAAAGCAGTCACTCTTAAGACAGCACGTGGGCGTAAACCCTCGTCTCAACGGTGGCTTCAAAGACAATTAAATGATCCTTATGTACAAGAGGCTCAAGCAAGAGGTTTTAGGTCTCGAGCAGCCTTTAAGTTGCTTGAATTAAATGAAAAATTCCATTTTCTAAAAGCGGGCATCACATTGATTGACTTGGGGGCGGCTCCAGGTGGTTGGACACAAGTAGCTGTCCAAAAAATTAATCCTCGTCACACAGGTGGAAAGGTTATTGGAATAGATCTCTTAGAAATTCAACCAATAACGGATGCGACATTAATACAAGGAGATTTTTTAGAAACAAACCAACGTCAGAAAATTAAAGAACTTATAAAAGAAAAGGTACACGTTGTTATTAGTGATATGGCGGCTTCTACCATTGGACATGCCAATACTGATCATTTAAGAACGATTGCATTAGCTGAAATGGCTTTTAATTTTGCACGTGAAGTTTTGATGCCTGGAGGGACTTTTATTTCAAAGGTTTTTCAAGGTGGGACTGATCCTGAACTTTTGAAGGAAATGAAACGCCACTTTAAGACTATTAAGCATGTGAAACCTCAAGCAAGTCGTAAAGAGTCACCTGAGATGTATGTCATTGCCTTAGGATTTCAGCAATGA
PROTEIN sequence
Length: 227
MSSIKHTVRAKAVTLKTARGRKPSSQRWLQRQLNDPYVQEAQARGFRSRAAFKLLELNEKFHFLKAGITLIDLGAAPGGWTQVAVQKINPRHTGGKVIGIDLLEIQPITDATLIQGDFLETNQRQKIKELIKEKVHVVISDMAASTIGHANTDHLRTIALAEMAFNFAREVLMPGGTFISKVFQGGTDPELLKEMKRHFKTIKHVKPQASRKESPEMYVIALGFQQ*