ggKbase home page

SCNpilot_expt_500_p_scaffold_9773_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_9773_curated_1
unknown

Not on your lists

comp(28..477)
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_9773_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

529..1113
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13436.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13436.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_9773_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1085..3871)
DNA (2787bp) protein (929aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF7D
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF7D
Uncharacterized protein {ECO:0000313|EMBL:AIL13435.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13435.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_9773_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3878..4534)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACEB
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACEB
Uncharacterized protein {ECO:0000313|EMBL:AIL13434.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13434.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_9773_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4607..5269)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACEB
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACEB
Uncharacterized protein {ECO:0000313|EMBL:AIL12611.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12611.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_9773_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5266..5862)
DNA (597bp) protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12612.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12612.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
TraF-like protein id=4756829 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
TraF-like protein id=4756829 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_9773_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5924..6154
DNA (231bp) protein (77aa)
Ribbon-helix-helix , copG family protein n=3 Tax=Haemophilus parasuis RepID=U4RLJ1_HAEPR
Ribbon-helix-helix , copG family protein n=3 Tax=Haemophilus parasuis RepID=U4RLJ1_HAEPR
Uncharacterized protein {ECO:0000313|EMBL:AIL12613.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12613.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_9773_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6141..6419
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI0003755AF0
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI0003755AF0
Uncharacterized protein {ECO:0000313|EMBL:AIL12614.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12614.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_9773_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6425..8233)
DNA (1809bp) protein (603aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13433.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13433.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
conjugative transfer protein TraN id=4756828 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
conjugative transfer protein TraN id=4756828 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_9773_curated_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8230..8757)
DNA (528bp) protein (176aa)
conjugative transfer protein TrbC n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A9D5
conjugative transfer protein TrbC n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A9D5
Uncharacterized protein {ECO:0000313|EMBL:AIL12616.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12616.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Displaying 10 items

View Taxonomy