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SCNpilot_expt_500_p_scaffold_260_curated

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_260_curated_1
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

162..1223
DNA (1062bp) protein (354aa)
Putative neuraminidase (Sialidase) {ECO:0000313|EMBL:CDZ81364.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
osa:4343377 Os07g0516000 id=40772 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
SCNpilot_expt_500_p_scaffold_260_curated_2
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

1264..1917
DNA (654bp) protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81363.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_3
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1914..3599)
DNA (1686bp) protein (562aa)
pFP-BETA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; K00895 pyrophosphate--fructose-6-phosphate 1-phosphotransferase [EC:2.7.1.90]
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZI0_PARAV
6-phosphofructokinase {ECO:0000313|EMBL:CDZ81362.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_4
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3609..4403)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LDN6_9CHLA
Fermentation/respiration switch protein {ECO:0000313|EMBL:CDZ81361.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K06889
SCNpilot_expt_500_p_scaffold_260_curated_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4506..5885)
DNA (1380bp) protein (460aa)
sdaB; L-serine ammonia-lyase; K01752 L-serine dehydratase [EC:4.3.1.17] rbh
Probable L-serine ammonia-lyase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCU7_PARUW
L-serine dehydratase 1 {ECO:0000313|EMBL:CDZ81360.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_6
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

6054..6566
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R836_9CHLA
Uncharacterized protein {ECO:0000313|EMBL:CDZ81359.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
uncharacterized LOC100679277
SCNpilot_expt_500_p_scaffold_260_curated_7
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(6608..7903)
DNA (1296bp) protein (432aa)
Uncharacterized MFS-type transporter Rv2456c/MT2531 n=2 Tax=Parachlamydia acanthamoebae RepID=F8L2B7_PARAV
Multidrug resistance protein D {ECO:0000313|EMBL:CDZ81358.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
MFS-type transporter
SCNpilot_expt_500_p_scaffold_260_curated_8
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

8134..10674
DNA (2541bp) protein (847aa)
DNA mismatch repair protein MutS n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=MUTS_PARUW rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS rbh
SCNpilot_expt_500_p_scaffold_260_curated_9
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

10765..10887
DNA (123bp) protein (41aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81356.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_10
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(10943..12016)
DNA (1074bp) protein (358aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}
rlmN2; ribosomal RNA large subunit methyltransferase N 2; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZ51_PARAV
SCNpilot_expt_500_p_scaffold_260_curated_11
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12308..13126)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZ49_PARAV
PGL/p-HBAD biosynthesis glycosyltransferase/MT3031 {ECO:0000313|EMBL:CDZ81351.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_260_curated_12
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

13184..13591
DNA (408bp) protein (136aa)
Uncharacterized protein yuxK n=2 Tax=Waddlia chondrophila RepID=F8LCF2_9CHLA
Uncharacterized protein {ECO:0000313|EMBL:CDZ81350.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
conserved membrane-associated protein
SCNpilot_expt_500_p_scaffold_260_curated_13
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

13588..14814
DNA (1227bp) protein (409aa)
Putative choloylglycine hydrolase {ECO:0000313|EMBL:CDZ81349.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

15012..15689
DNA (678bp) protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81348.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_15
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(15690..17456)
DNA (1767bp) protein (589aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDD5_PARUW
SCNpilot_expt_500_p_scaffold_260_curated_16
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

17549..18772
DNA (1224bp) protein (408aa)
hypothetical protein; K01295 glutamate carboxypeptidase [EC:3.4.17.11]
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZ38_PARAV
Carboxypeptidase G2 {ECO:0000313|EMBL:CDZ81346.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_17
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18769..20142
DNA (1374bp) protein (458aa)
Acetylornithine aminotransferase n=2 Tax=Waddlia chondrophila RepID=D6YVN8_WADCW
Acetylornithine/acetyl-lysine aminotransferase {ECO:0000313|EMBL:CDZ81345.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
argD; acetylornithine aminotransferase
SCNpilot_expt_500_p_scaffold_260_curated_18
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

20147..21163
DNA (1017bp) protein (339aa)
astA; Arginine N-succinyltransferase beta subunit (EC:2.3.1.109); K00673 arginine N-succinyltransferase [EC:2.3.1.109]
Arginine N-succinyltransferase beta subunit n=2 Tax=Waddlia chondrophila RepID=D6YVN7_WADCW
Arginine N-succinyltransferase subunit beta {ECO:0000313|EMBL:CDZ81344.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_19
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

21184..22587
DNA (1404bp) protein (468aa)
astD; N-succinylglutamate 5-semialdehyde dehydrogenase; K06447 succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
N-succinylglutamate 5-semialdehyde dehydrogenase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZ35_PARAV
N-succinylglutamate 5-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDZ81343.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_20
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

22584..23882
DNA (1299bp) protein (433aa)
astB; N-succinylarginine dihydrolase; K01484 succinylarginine dihydrolase [EC:3.5.3.23]
N-succinylarginine dihydrolase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZ34_PARAV
N-succinylarginine dihydrolase {ECO:0000313|EMBL:CDZ81342.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_21
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(23915..24190)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81341.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_22
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(24329..24916)
DNA (588bp) protein (196aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Peptidylprolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N9Y9_9GAMM
SCNpilot_expt_500_p_scaffold_260_curated_23
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(24973..25182)
DNA (210bp) protein (70aa)
Putative transposase n=2 Tax=Waddlia chondrophila RepID=D6YWB4_WADCW
Transposase {ECO:0000313|EMBL:CDZ81339.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
transposase
SCNpilot_expt_500_p_scaffold_260_curated_24
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

25531..26634
DNA (1104bp) protein (368aa)
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCD3_PARUW
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_25
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(26665..27831)
DNA (1167bp) protein (389aa)
rlmI; ribosomal RNA large subunit methyltransferase I; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R577_9CHLA
Ribosomal RNA large subunit methyltransferase I {ECO:0000313|EMBL:CDZ81337.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_26
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

27930..35051
DNA (7122bp) protein (2374aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81336.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_27
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

35206..35709
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81335.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_28
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

36015..36539
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81334.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_29
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

36708..37193
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81333.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_260_curated_30
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

37213..37704
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81332.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Displaying items 1-30 of 52 in total

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