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SCNpilot_expt_500_p_scaffold_103_curated

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Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_103_curated_1
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3..452
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81114.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_2
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

719..1963
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU24_AMOA5
Ankyrin repeat protein {ECO:0000313|EMBL:CDZ81115.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_103_curated_3
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2013..2996)
DNA (984bp) protein (328aa)
Tyrosine recombinase XerC n=2 Tax=Parachlamydia acanthamoebae RepID=F8KW21_PARAV
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
xerC; tyrosine recombinase xerC; K03733 integrase/recombinase XerC
SCNpilot_expt_500_p_scaffold_103_curated_4
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3011..3922)
DNA (912bp) protein (304aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
rnz; ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11]
Ribonuclease Z n=2 Tax=Parachlamydia acanthamoebae RepID=F8KVW4_PARAV
SCNpilot_expt_500_p_scaffold_103_curated_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3935..5092)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KVW2_PARAV
Rhomboid protease GlpG {ECO:0000313|EMBL:CDZ81118.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K02441 GlpG protein
SCNpilot_expt_500_p_scaffold_103_curated_6
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(5092..5589)
DNA (498bp) protein (166aa)
Heptose adenosyltransferase n=2 Tax=Waddlia chondrophila RepID=D6YRU7_WADCW
Bifunctional protein HldE {ECO:0000313|EMBL:CDZ81119.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hldC; heptose adenosyltransferase
SCNpilot_expt_500_p_scaffold_103_curated_7
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(5603..8050)
DNA (2448bp) protein (816aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
lon; lon protease; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=2 Tax=Parachlamydia acanthamoebae RepID=F8KW20_PARAV
SCNpilot_expt_500_p_scaffold_103_curated_8
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

8205..8891
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6ME09_PARUW
UGMP family protein {ECO:0000313|EMBL:CDZ81121.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_103_curated_9
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

9061..9240
DNA (180bp) protein (60aa)
30S ribosomal protein S21 n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXM4_PARAV
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
SCNpilot_expt_500_p_scaffold_103_curated_10
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

9397..10548
DNA (1152bp) protein (384aa)
Chaperone protein DnaJ n=2 Tax=Parachlamydia acanthamoebae RepID=F8L273_PARAV
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
dnaJ; molecular chaperone DnaJ; K03686 molecular chaperone DnaJ
SCNpilot_expt_500_p_scaffold_103_curated_11
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(10735..11460)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1D8_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ81124.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_103_curated_12
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(11517..12290)
DNA (774bp) protein (258aa)
Putative metaLLo-hydrolase yycJ n=2 Tax=Parachlamydia acanthamoebae RepID=F8L272_PARAV
Putative metallo-hydrolase YycJ {ECO:0000313|EMBL:CDZ81125.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
yycJ; metaLLo-hydrolase yycJ
SCNpilot_expt_500_p_scaffold_103_curated_13
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

12506..12832
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81126.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12878..13720)
DNA (843bp) protein (281aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81127.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_15
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(13807..14223)
DNA (417bp) protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81128.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_16
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(14422..14844)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81129.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_17
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

15071..15724
DNA (654bp) protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81130.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_18
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(15766..16944)
DNA (1179bp) protein (393aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3]
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXP6_HERA2
RNA-splicing ligase RtcB {ECO:0000313|EMBL:CDZ81131.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_19
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(16931..17518)
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81132.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_20
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(17585..18322)
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81133.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_21
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18892..19065
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81134.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_22
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(19355..19567)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81135.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_23
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(19571..22036)
DNA (2466bp) protein (822aa)
Putative multifunctional cell division protein ftsK n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6ME05_PARUW
DNA translocase FtsK {ECO:0000313|EMBL:CDZ81136.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family rbh
SCNpilot_expt_500_p_scaffold_103_curated_24
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(22226..23002)
DNA (777bp) protein (259aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
uppP; undecaprenyl-diphosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase n=2 Tax=Parachlamydia acanthamoebae RepID=F8L268_PARAV
SCNpilot_expt_500_p_scaffold_103_curated_25
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(23135..24655)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KWB9_PARAV
ComEC/Rec2-related protein {ECO:0000313|EMBL:CDZ81138.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K02238 competence protein ComEC
SCNpilot_expt_500_p_scaffold_103_curated_26
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(24837..25403)
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81139.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_103_curated_27
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

25550..26356
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6ME02_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ81140.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_103_curated_28
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

26393..27340
DNA (948bp) protein (316aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hprK1; hPr kinase/phosphorylase 1; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
HPr kinase/phosphorylase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXL6_PARAV
SCNpilot_expt_500_p_scaffold_103_curated_29
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

27344..27616
DNA (273bp) protein (91aa)
Putative phosphocarrier protein hpr (Histidine-containing phosphocarrier protein of the PTS) n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6ME00_PARUW
Phosphocarrier protein HPr {ECO:0000313|EMBL:CDZ81142.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ptsH; phosphocarrier protein HPr (histidine-containing phosphocarrier protein of the PTS); K11189 phosphocarrier protein
SCNpilot_expt_500_p_scaffold_103_curated_30
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

27617..29395
DNA (1779bp) protein (593aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ptsI; phosphoenolpyruvate-protein phosphotransferase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LC92_9CHLA
Displaying items 1-30 of 119 in total

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