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scnpilot_expt_750_bf_scaffold_2600

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2600_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..913
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3A899_PSEAI
TraA {ECO:0000313|EMBL:AKH45406.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 1
conjugal transfer relaxase TraI
scnpilot_expt_750_bf_scaffold_2600_2
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

948..1376
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN15_9XANT
Uncharacterized protein {ECO:0000313|EMBL:CCF70595.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axono
scnpilot_expt_750_bf_scaffold_2600_3
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1334..1555
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN14_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KFJ90151.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
scnpilot_expt_750_bf_scaffold_2600_4
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1542..2480
DNA (939bp) protein (313aa)
Trypsin domain-containing protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3ASD6_PSEAI
Serine protease {ECO:0000313|EMBL:AJW29853.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
trypsin domain-containing protein
scnpilot_expt_750_bf_scaffold_2600_5
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2573..2908
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN12_9XANT
Uncharacterized protein {ECO:0000313|EMBL:CCF70592.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axono
hypothetical protein
scnpilot_expt_750_bf_scaffold_2600_6
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2988..4013
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN11_9XANT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCF70591.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axono
hypothetical protein
scnpilot_expt_750_bf_scaffold_2600_7
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4140..4814)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SG29_GALCS
hypothetical protein Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2600_8
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4811..5047)
DNA (237bp) protein (79aa)
Putative transcriptional regulator n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3BDE7_PSEAI
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABM59077.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verm
scnpilot_expt_750_bf_scaffold_2600_9
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5044..5214)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Pseudomonas monteilii RepID=UPI0002FF97E8
Uncharacterized protein {ECO:0000313|EMBL:CCU56619.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter denitr
hypothetical protein
scnpilot_expt_750_bf_scaffold_2600_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5258..5413)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1F451_PSEAI
Uncharacterized protein; TaxID=983918 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa HB13.;"
scnpilot_expt_750_bf_scaffold_2600_11

Not on your lists

comp(5418..5705)
DNA (288bp) protein (96aa)
Translation repressor RelE n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1F7J3_PSEAI
Putative plasmid stabilazation protein {ECO:0000313|EMBL:AFV47237.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Death on curing protein, Doc toxin
scnpilot_expt_750_bf_scaffold_2600_12

Not on your lists

comp(5702..5992)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A64E7
Putative plasmid stabilazation protein {ECO:0000313|EMBL:AFV47236.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_2600_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6100..6765
DNA (666bp) protein (222aa)
Resolvase n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3A891_PSEAI
Res {ECO:0000313|EMBL:AKH45416.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15
hypothetical protein
scnpilot_expt_750_bf_scaffold_2600_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6762..7055
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1F7H2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AKH45417.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
scnpilot_expt_750_bf_scaffold_2600_15
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7137..7769
DNA (633bp) protein (211aa)
ParA n=2 Tax=Proteobacteria RepID=Q6X3G8_PSEAI rbh
Plasmid partitioning protein {ECO:0000313|EMBL:CCU56600.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter d
Putative plasmid partitioning protein
scnpilot_expt_750_bf_scaffold_2600_16
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7790..8014
DNA (225bp) protein (75aa)
Plasmid stabilization protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3BDD9_PSEAI
Partitioning protein B {ECO:0000313|EMBL:AJW29844.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. L
parB; hypothetical protein
scnpilot_expt_750_bf_scaffold_2600_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8069..9064
DNA (996bp) protein (332aa)
RepA n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G6_PSEAI rbh
RepA {ECO:0000313|EMBL:AAP22621.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
RepA
scnpilot_expt_750_bf_scaffold_2600_18
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10075..10977
DNA (903bp) protein (301aa)
KfrA protein n=1 Tax=Pseudomonas aeruginosa RepID=A7MAI0_PSEAI
KfrA protein {ECO:0000313|EMBL:AJW29861.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
kfrA; transcriptional regulator KfrA
scnpilot_expt_750_bf_scaffold_2600_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11144..11530)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M2ZBT9_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AKH45393.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
scnpilot_expt_750_bf_scaffold_2600_20
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11542..12063)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3ASD4_PSEAI
TraG/TraD family protein {ECO:0000313|EMBL:CCF70527.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axon
TraG conjugal transfer transmembrane protein
scnpilot_expt_750_bf_scaffold_2600_21
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12003..13916)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3ASD4_PSEAI rbh
TraG/TraD family protein {ECO:0000313|EMBL:CCF70527.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axon
conjugal transfer protein TraG
scnpilot_expt_750_bf_scaffold_2600_22
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14028..14369)
DNA (342bp) protein (114aa)
TraC n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G1_PSEAI
Conjugal transfer protein TraC {ECO:0000313|EMBL:AJW29857.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
Hypothetical protein
scnpilot_expt_750_bf_scaffold_2600_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14563..15381
DNA (819bp) protein (273aa)
TraA n=1 Tax=Pseudomonas aeruginosa RepID=M1RFK1_PSEAI
TraA {ECO:0000313|EMBL:AGG19209.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
traA; Conjugal transfer protein TraA
Displaying 23 items

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