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scnpilot_expt_750_bf_scaffold_4683

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_4683_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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78..314
DNA (237bp) protein (79aa)
UPI0003D0595D related cluster n=1 Tax=unknown RepID=UPI0003D0595D
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" sou
rpsQ; 30S ribosomal protein S17
scnpilot_expt_750_bf_scaffold_4683_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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546..914
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Rhizobium sp. CF080 RepID=J2IHD4_9RHIZ
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
scnpilot_expt_750_bf_scaffold_4683_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


927..1235
DNA (309bp) protein (103aa)
50S ribosomal protein L24 n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=RL24_RHILW
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
scnpilot_expt_750_bf_scaffold_4683_4
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1228..1785
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PXC7_9RHIZ rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteriu
rplE; 50S ribosomal protein L5
scnpilot_expt_750_bf_scaffold_4683_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1818..2123
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A4U3_RHIFH
rpsN; ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" so
scnpilot_expt_750_bf_scaffold_4683_6
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2136..2534
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Rhizobium giardinii RepID=UPI000362512A
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;"
scnpilot_expt_750_bf_scaffold_4683_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2579..3112
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=2 Tax=Agrobacterium RepID=RL6_AGRT5 rbh
rplF; 50S ribosomal protein L6 rbh
50S ribosomal protein L6 {ECO:0000313|EMBL:KJX88191.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrob
scnpilot_expt_750_bf_scaffold_4683_8
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3125..3487
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00038115FF
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
scnpilot_expt_750_bf_scaffold_4683_9
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3632..4084
DNA (453bp) protein (151aa)
30S ribosomal protein S5 n=1 Tax=Rhizobium sp. CF080 RepID=J2IE34_9RHIZ
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Ag
scnpilot_expt_750_bf_scaffold_4683_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4155..4355
DNA (201bp) protein (67aa)
50S ribosomal protein L30 n=1 Tax=Rhizobium radiobacter RepID=UPI00035EEE30
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
scnpilot_expt_750_bf_scaffold_4683_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4369..4839
DNA (471bp) protein (157aa)
50S ribosomal protein L15 n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X7W3_RHIFR
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobiu
rplO; ribosomal protein L15
scnpilot_expt_750_bf_scaffold_4683_12
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5074..5436
DNA (363bp) protein (121aa)
Protein translocase subunit SecY n=1 Tax=Rhizobium sp. CF122 RepID=J2IS45_9RHIZ
Suspect SCG annotation. See neighboring gene [scnpilot_expt_750_bf_scaffold_4683_13].
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
scnpilot_expt_750_bf_scaffold_4683_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5513..6346
DNA (834bp) protein (278aa)
Protein translocase subunit SecY n=2 Tax=Rhizobium etli RepID=Q2K9J6_RHIEC
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
scnpilot_expt_750_bf_scaffold_4683_14
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6343..6993
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HL58_9RHIZ rbh
scnpilot_expt_750_bf_scaffold_4683_15
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7219..7587
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=2 Tax=Rhizobium RepID=K0PYX1_9RHIZ
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
rpsM; 30S ribosomal protein S13
scnpilot_expt_750_bf_scaffold_4683_16
unknown

Not on your lists

7724..7792
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 16 items

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