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scnpilot_expt_750_bf_scaffold_1055

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1055_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..413
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK4_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06316.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_1055_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

456..692
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06317.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_1055_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

697..1632
DNA (936bp) protein (312aa)
Lytic transglycosylase, catalytic n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUC7_NITWN rbh
lytic transglycosylase, catalytic
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABA04114.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
scnpilot_expt_750_bf_scaffold_1055_4
unknown

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1629..1874
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1055_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1871..3607
DNA (1737bp) protein (579aa)
Type IV secretory pathway VirD2 components n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK0_OLICO rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI06319.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
type IV secretory pathway VirD2 components rbh
scnpilot_expt_750_bf_scaffold_1055_6
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3720..3974
DNA (255bp) protein (85aa)
Prevent-host-death protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUC1_NITWN
prevent-host-death protein
Prevent-host-death protein {ECO:0000313|EMBL:ABA04120.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogr
scnpilot_expt_750_bf_scaffold_1055_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3971..4231
DNA (261bp) protein (87aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUC0_NITWN
twitching motility protein PilT
scnpilot_expt_750_bf_scaffold_1055_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4258..7230)
DNA (2973bp) protein (991aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUX0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32961.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
transposase Tn3 family protein
scnpilot_expt_750_bf_scaffold_1055_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7360..7659
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRG3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32962.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
Resolvase domain protein
scnpilot_expt_750_bf_scaffold_1055_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7656..7910
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRG3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32962.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
Resolvase Protein
scnpilot_expt_750_bf_scaffold_1055_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8355..9242)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3F0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32963.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1055_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9250..10251)
DNA (1002bp) protein (334aa)
Phosphonate dehydrogenase (EC:1.20.1.1)
Uncharacterized protein n=2 Tax=cellular organisms RepID=K8NWT8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32964.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_expt_750_bf_scaffold_1055_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10264..11082)
DNA (819bp) protein (273aa)
Phosphite transport system permease ptxC n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZV9_9BRAD rbh
Phosphite transport system permease ptxC {ECO:0000313|EMBL:EKS32965.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia br
phosphonate ABC transporter, inner membrane subunit
scnpilot_expt_750_bf_scaffold_1055_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11090..11950)
DNA (861bp) protein (287aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUX4_9BRAD rbh
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EKS32966.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo
phosphate ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_1055_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11947..12798)
DNA (852bp) protein (284aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
Phosphonate ABC transporter, ATP-binding protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRG9_9BRAD rbh
phosphonate ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_1055_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13466..14131
DNA (666bp) protein (222aa)
TenA/Thi-4 family protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHJ9_OLICO rbh
tena/thi-4 family
TenA/Thi-4 family protein {ECO:0000313|EMBL:AEI06320.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxi
scnpilot_expt_750_bf_scaffold_1055_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14289..16310
DNA (2022bp) protein (674aa)
Conjugal transfer protein traG n=2 Tax=Oligotropha carboxidovorans RepID=B6JHJ8_OLICO rbh
Conjugal transfer protein traG {ECO:0000313|EMBL:AEI06321.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
traG3; conjugal transfer protein traG
scnpilot_expt_750_bf_scaffold_1055_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16314..16754
DNA (441bp) protein (147aa)
CopG-like domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHJ7_OLICO
CopG-like domain protein
CopG-like domain protein {ECO:0000313|EMBL:AEI06322.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxid
scnpilot_expt_750_bf_scaffold_1055_19
unknown

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16751..16858
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1055_20
unknown

Not on your lists

17293..18219
DNA (927bp) protein (309aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1055_21
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18574..19689)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036CADDC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ16499.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;
scnpilot_expt_750_bf_scaffold_1055_22
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19806..20936)
DNA (1131bp) protein (377aa)
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Displaying 22 items

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