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scnpilot_expt_750_bf_scaffold_1548

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1548_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..335
DNA (333bp) protein (111aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1E6_9SPHN
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ENY81287.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp
scnpilot_expt_750_bf_scaffold_1548_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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438..1103
DNA (666bp) protein (222aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC22_9SPHN
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ENY81288.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingop
L-carnitine dehydratase/bile acid-inducible protein F
scnpilot_expt_750_bf_scaffold_1548_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1100..1612
DNA (513bp) protein (171aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC22_9SPHN
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ENY81288.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingop
L-carnitine dehydratase/bile acid-inducible protein F
scnpilot_expt_750_bf_scaffold_1548_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..3046
DNA (1341bp) protein (447aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ENY81289.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ENY81289.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
phaA; Acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USJ8_9SPHN
scnpilot_expt_750_bf_scaffold_1548_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3043..3717)
DNA (675bp) protein (225aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A0_9BRAD rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EFI50738.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS
ErfK/YbiS/YcfS/YnhG family protein rbh
scnpilot_expt_750_bf_scaffold_1548_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4097..5071
DNA (975bp) protein (325aa)
Magnesium and cobalt transporter CorA n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXD5_9BRAD rbh
Magnesium and cobalt transporter CorA {ECO:0000313|EMBL:EKS32100.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia cleve
Mg2+ transporter protein, CorA family protein
scnpilot_expt_750_bf_scaffold_1548_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5072..7858)
DNA (2787bp) protein (929aa)
ligD; ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase D n=1 Tax=Afipia broomeae ATCC 49717 PF92_9BRAD">RepID=K8PF92_9BRAD rbh
DNA ligase D {ECO:0000313|EMBL:EKS41282.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
scnpilot_expt_750_bf_scaffold_1548_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7905..8780
DNA (876bp) protein (292aa)
Probable DNA repair protein HMPREF9695_00375 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSG4_9BRAD rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia b
Ku-like protein
scnpilot_expt_750_bf_scaffold_1548_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8782..9237)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKL4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41284.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
MarR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1548_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9465..9890
DNA (426bp) protein (142aa)
Peroxiredoxin, Ohr subfamily n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PP66_9BRAD
Peroxiredoxin, Ohr subfamily {ECO:0000313|EMBL:EKS41285.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC
organic hydroperoxide resistance protein
scnpilot_expt_750_bf_scaffold_1548_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9987..10574)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIE7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41286.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
fixR; short-chain alcohol dehydrogenase
Displaying 11 items

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