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scnpilot_expt_750_bf_scaffold_1586

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1586_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..592
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THX0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98565.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_expt_750_bf_scaffold_1586_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(491..1060)
DNA (570bp) protein (190aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBC4_NIAKG
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:AEW03424.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
scnpilot_expt_750_bf_scaffold_1586_3
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1118..1642)
DNA (525bp) protein (175aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2K8_9CHLR
dihydrofolate reductase Tax=RBG_16_Ignavibacteria_36_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1586_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1707..2126)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAL3_NIAKG
DoxX-like family protein
DoxX-like family protein {ECO:0000313|EMBL:AKD54800.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_expt_750_bf_scaffold_1586_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2368..3348
DNA (981bp) protein (327aa)
Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBC3_NIAKG rbh
transcriptional regulator, AraC family with amidase-like domain rbh
Transcriptional regulator, AraC family with amidase-like domain {ECO:0000313|EMBL:AEW03423.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Ni
scnpilot_expt_750_bf_scaffold_1586_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3587..4072
DNA (486bp) protein (162aa)
Phospholipid-binding protein, PBP family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T869_NIAKG
phospholipid-binding protein, PBP family
Phospholipid-binding protein, PBP family {ECO:0000313|EMBL:AEV98020.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niaste
scnpilot_expt_750_bf_scaffold_1586_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4185..4637
DNA (453bp) protein (151aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECH3_RUNSL
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEI47848.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" sour
scnpilot_expt_750_bf_scaffold_1586_8
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4682..5515)
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=1715070 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1586_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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5686..6270
DNA (585bp) protein (195aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X7_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_expt_750_bf_scaffold_1586_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6337..7440
DNA (1104bp) protein (368aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X6_NIAKG
anti-FecI sigma factor FecR Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anti-FecI sigma factor FecR
scnpilot_expt_750_bf_scaffold_1586_11
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7802..9127
DNA (1326bp) protein (442aa)
integrase n=1 Tax=Empedobacter brevis RepID=UPI00036A9533 rbh
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADQ15936.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (str
scnpilot_expt_750_bf_scaffold_1586_12
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9345..9533
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO11291.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mi
scnpilot_expt_750_bf_scaffold_1586_13
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9555..9947
DNA (393bp) protein (131aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT17_9SPHI
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteria
ssb4; single-strand binding protein
scnpilot_expt_750_bf_scaffold_1586_14
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9992..11065
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000376E0A4 rbh
Phage/plasmid-related protein TIGR03299 {ECO:0000313|EMBL:EFK33959.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="C
phage/plasmid-like protein
scnpilot_expt_750_bf_scaffold_1586_15
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11124..11501
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000381E5FC
DNA-binding protein {ECO:0000313|EMBL:KGO11294.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mirico
hypothetical protein
scnpilot_expt_750_bf_scaffold_1586_16
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11519..11857
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0F8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65901.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
scnpilot_expt_750_bf_scaffold_1586_17
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11871..12065
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003794681
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM37817.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
scnpilot_expt_750_bf_scaffold_1586_18
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12078..12680
DNA (603bp) protein (201aa)
PRTRC system protein E n=1 Tax=Empedobacter brevis RepID=UPI00037B6F48 rbh
Prtrc system protein e {ECO:0000313|EMBL:KGO11296.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mir
prtrc system protein e rbh
scnpilot_expt_750_bf_scaffold_1586_19
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12708..12926
DNA (219bp) protein (73aa)
PRTRC system protein C n=2 Tax=Bacteroidetes RepID=C2G274_9SPHI
PRTRC system protein C
PRTRC system protein C {ECO:0000313|EMBL:KFF20071.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
scnpilot_expt_750_bf_scaffold_1586_20
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12944..14110
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037ADFFE rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO11298.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mi
hypothetical protein
scnpilot_expt_750_bf_scaffold_1586_21
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14107..14829
DNA (723bp) protein (241aa)
PRTRC system protein B n=1 Tax=Empedobacter brevis RepID=UPI00036876CC rbh
PRTRC system protein B {ECO:0000313|EMBL:KGO11299.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mir
PRTRC system protein B
scnpilot_expt_750_bf_scaffold_1586_22
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14829..15635
DNA (807bp) protein (269aa)
thiazole biosynthesis adenylyltransferase ThiF n=1 Tax=Empedobacter brevis RepID=UPI00035C8E38 rbh
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:KGO11300.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabe
thiamine biosynthesis protein ThiF
scnpilot_expt_750_bf_scaffold_1586_23
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15914..16363)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000376CB3A
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AIM37833.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium
Displaying 23 items

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