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scnpilot_expt_750_bf_scaffold_1603

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1603_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..865
DNA (864bp) protein (288aa)
chain-length determining protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378DABD
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1603_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

846..1769
DNA (924bp) protein (308aa)
hypothetical protein id=12497711 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AAZ97745.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillu
scnpilot_expt_750_bf_scaffold_1603_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1785..2477
DNA (693bp) protein (231aa)
hypothetical protein id=12497712 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1603_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2521..3606
DNA (1086bp) protein (362aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=GWE1_Thiobacillus_62_9_curated
GDP-mannose 4,6-dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI000363D3B1 rbh
GDP-mannose 4,6-dehydratase
scnpilot_expt_750_bf_scaffold_1603_5
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3649..4002
DNA (354bp) protein (118aa)
hypothetical protein id=12497714 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:GAO34438.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amni
hypothetical protein
scnpilot_expt_750_bf_scaffold_1603_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4089..4967
DNA (879bp) protein (293aa)
GDP-L-fucose synthetase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
GDP-L-fucose synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F6B5E
GDP-L-fucose synthetase
scnpilot_expt_750_bf_scaffold_1603_7
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4964..5776
DNA (813bp) protein (271aa)
Sulfotransferase family n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KRD0_9SYNC
Putative uncharacterized protein {ECO:0000313|EMBL:EDX78341.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
scnpilot_expt_750_bf_scaffold_1603_8
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5848..7284
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037DD8B6
Uncharacterized protein {ECO:0000313|EMBL:EKU80714.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
scnpilot_expt_750_bf_scaffold_1603_9
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7268..8779
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036F0331 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU80715.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
polysaccharide biosynthesis protein
scnpilot_expt_750_bf_scaffold_1603_10
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8776..9735
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JF76_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ESJ25675.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HP
hypothetical protein
scnpilot_expt_750_bf_scaffold_1603_11

Not on your lists

9776..10591
DNA (816bp) protein (272aa)
Glycosyl transferase, family 2 n=1 Tax=uncultured bacterium RepID=K2CQA8_9BACT
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EKD95370.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1603_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10773..11663
DNA (891bp) protein (297aa)
Tax=CG_Rhodocyc_01
scnpilot_expt_750_bf_scaffold_1603_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11680..12441
DNA (762bp) protein (254aa)
Putative glycosyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJC6_9BURK
Putative glycosyltransferase {ECO:0000313|EMBL:EHR70147.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
glycosyl transferase family protein
scnpilot_expt_750_bf_scaffold_1603_14
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

12438..13688
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E6A372
parallel beta-helix repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
scnpilot_expt_750_bf_scaffold_1603_15
unknown

Not on your lists

13711..14676
DNA (966bp) protein (322aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1603_16
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14673..15764
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI000375F50C rbh
Glycosyltransferase {ECO:0000313|EMBL:EUJ11295.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
group 1 glycosyl transferase
scnpilot_expt_750_bf_scaffold_1603_17
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15772..16938
DNA (1167bp) protein (389aa)
Putative glycosyltransferase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7Z5_9EURY
putative glycosyltransferase Tax=RBG_13_Deltaproteobacteria_61_14_curated
putative glycosyltransferase
scnpilot_expt_750_bf_scaffold_1603_18
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17004..18209
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000315C15D rbh
putative glycosyl transferase group 1
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_bf_scaffold_1603_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18234..19367
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037D0322
Uncharacterized protein {ECO:0000313|EMBL:KIZ39707.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
Predicted Fe-S oxidoreductases
scnpilot_expt_750_bf_scaffold_1603_20
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19403..20464
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00038219E6 rbh
group 1 glycosyl transferase
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_bf_scaffold_1603_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20638..21684
DNA (1047bp) protein (349aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydro
dTDP-glucose 4,6-dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI0003602592
scnpilot_expt_750_bf_scaffold_1603_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22013..22951
DNA (939bp) protein (313aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
glucose-1-phosphate thymidylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FD75E rbh
scnpilot_expt_750_bf_scaffold_1603_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23099..23641
DNA (543bp) protein (181aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F609D rbh
scnpilot_expt_750_bf_scaffold_1603_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23638..24528
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Thiobacillus thioparus RepID=UPI0003746292 rbh
scnpilot_expt_750_bf_scaffold_1603_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24592..24918
DNA (327bp) protein (109aa)
Uncharacterized protein n=5 Tax=Xylella fastidiosa RepID=B2I506_XYLF2
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1603_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24915..25196
DNA (282bp) protein (94aa)
Transcriptional regulator, XRE family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AH6_SOLUE
XRE family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
XRE family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1603_27
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25242..26207
DNA (966bp) protein (322aa)
UDP-glucose 4-epimerase/UDP-galactose 4-epimerase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5R991_9RHOO
UDP-glucose 4-epimerase/UDP-galactose 4-epimerase {ECO:0000313|EMBL:EGK72882.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;
UDP-glucose 4-epimerase/UDP-N-acetylglucosamine 4-epimerase
scnpilot_expt_750_bf_scaffold_1603_28
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26336..26569
DNA (234bp) protein (78aa)
Uncharacterized protein id=1700079 bin=GWB2_Deltaproteobacteria_65_81 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1603_29
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26566..26937
DNA (372bp) protein (124aa)
Uncharacterized protein id=4443887 bin=GWA2_Deltaproteo_65_63 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1603_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26984..27577)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DA610 rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
Displaying items 1-30 of 31 in total

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