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scnpilot_expt_750_bf_scaffold_1967

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1967_1
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..319
DNA (318bp) protein (106aa)
Alpha/beta hydrolase {ECO:0000313|EMBL:KGD66551.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19
scnpilot_expt_750_bf_scaffold_1967_2
unknown

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comp(383..553)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1967_3
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(594..1355)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UV18_ROSS1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ90471.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sour
scnpilot_expt_750_bf_scaffold_1967_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1775..2071)
DNA (297bp) protein (99aa)
thiol-disulfide isomerase id=12498539 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
thiol-disulfide isomerase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
thiol-disulfide isomerase and thioredoxins family protein
scnpilot_expt_750_bf_scaffold_1967_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2083..3138)
DNA (1056bp) protein (352aa)
permease Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
permease; K07089 id=12498536 bin=THIO_MID species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
permease
scnpilot_expt_750_bf_scaffold_1967_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3230..3763)
DNA (534bp) protein (178aa)
sigma-70 family RNA polymerase sigma factor Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
sigma-70 family RNA polymerase sigma factor id=12498535 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sigma-70 family RNA polymerase sigma factor
scnpilot_expt_750_bf_scaffold_1967_7
unknown

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comp(3760..4014)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1967_8
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4051..6000)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX8_POLNA
type VI secretion protein
Type VI secretion protein {ECO:0000313|EMBL:AJP47688.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.
scnpilot_expt_750_bf_scaffold_1967_9
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6320..6844)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743BE1
peptidase
Peptidase {ECO:0000313|EMBL:AJP47689.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_expt_750_bf_scaffold_1967_10
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6841..7374)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0AB2
transposase
Transposase {ECO:0000313|EMBL:AJP47690.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_expt_750_bf_scaffold_1967_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7371..7505)
DNA (135bp) protein (45aa)
parB partition protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E0639
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
Displaying 11 items

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