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scnpilot_expt_750_bf_scaffold_795

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_795_1
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148..522)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82SP9_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD86170.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
scnpilot_expt_750_bf_scaffold_795_2
unknown

Not on your lists

comp(622..978)
DNA (357bp) protein (119aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_795_3
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2244..3086)
DNA (843bp) protein (281aa)
Transposase B n=2 Tax=Burkholderia pseudomallei RepID=A8EC57_BURPE rbh
transposase
Transposase {ECO:0000313|EMBL:AJK47059.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
scnpilot_expt_750_bf_scaffold_795_4
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3083..3346)
DNA (264bp) protein (88aa)
Transposase A n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LST3_BURGS
transposase A
Transposase A {ECO:0000313|EMBL:AEA65953.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strai
scnpilot_expt_750_bf_scaffold_795_5
unknown

Not on your lists

comp(4998..5699)
DNA (702bp) protein (234aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_795_6
unknown

Not on your lists

comp(6183..6653)
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_795_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7778..9898
DNA (2121bp) protein (707aa)
hyuA; hydantoin utilization protein A; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035DFCF8 rbh
hyuA; hydantoin utilization protein A
scnpilot_expt_750_bf_scaffold_795_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9895..11637
DNA (1743bp) protein (581aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RBG_16_Betaproteobacteria_64_18_curated
5-oxoprolinase (EC:3.5.2.9)
Hydantoin utilization protein B id=1703898 bin=GWA2_Methylomirabilis_73_35 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
scnpilot_expt_750_bf_scaffold_795_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11634..12110
DNA (477bp) protein (159aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Hypothetical conserved protein id=1703902 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative methylmalonyl-CoA epimerase
scnpilot_expt_750_bf_scaffold_795_10
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12107..13501
DNA (1395bp) protein (465aa)
phenylacetate--CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=CG_Desulfarul_01
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F4P4_9DELT rbh
phenylacetate--CoA ligase
scnpilot_expt_750_bf_scaffold_795_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13522..14304
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037CCC20 rbh
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
short chain dehydrogenase
scnpilot_expt_750_bf_scaffold_795_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14379..15515
DNA (1137bp) protein (379aa)
ABC transporter permease; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ABC transporter permease; K02066 putative ABC transport system permease protein id=12495788 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ABC transporter permease
scnpilot_expt_750_bf_scaffold_795_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15512..16339
DNA (828bp) protein (276aa)
toluene ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367C5EC
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_795_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16329..17297
DNA (969bp) protein (323aa)
ABC-type transport system periplasmic component; K02067 putative ABC transport system substrate-binding protein id=12494105 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-type transport system periplasmic component
ABC-type transport system periplasmic component {ECO:0000313|EMBL:AAZ96202.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilac
scnpilot_expt_750_bf_scaffold_795_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17294..17971
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003609858
putative lipoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
putative ABC transporter auxiliary component
scnpilot_expt_750_bf_scaffold_795_16
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18110..19840
DNA (1731bp) protein (577aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VZM9_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EGF31937.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9
hypothetical protein
scnpilot_expt_750_bf_scaffold_795_17
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19854..21269
DNA (1416bp) protein (472aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VZN0_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EGF31938.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9
hypothetical protein
scnpilot_expt_750_bf_scaffold_795_18
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21361..21708)
DNA (348bp) protein (116aa)
hypothetical protein; K08972 putative membrane protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein; K08972 putative membrane protein id=12496376 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
scnpilot_expt_750_bf_scaffold_795_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21735..22160)
DNA (426bp) protein (142aa)
Universal stress protein UspA-like protein n=1 Tax=Variovorax sp. CF313 RepID=J2KJQ6_9BURK
Universal stress protein UspA-like protein {ECO:0000313|EMBL:EJL80415.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
putative universal stress protein
scnpilot_expt_750_bf_scaffold_795_20
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22294..22614)
DNA (321bp) protein (107aa)
Glutaredoxin n=8 Tax=Bordetella RepID=K0MAT1_BORPB
glutaredoxin family protein 2
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
scnpilot_expt_750_bf_scaffold_795_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22661..23566)
DNA (906bp) protein (302aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00035F33AF
hemK1; HemK1
scnpilot_expt_750_bf_scaffold_795_22
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23599..24672)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Ralstonia pickettii (strain 12J) RepID=RF1_RALPJ
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Bu
scnpilot_expt_750_bf_scaffold_795_23
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24802..26049)
DNA (1248bp) protein (416aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=2 Tax=Burkholderia pseudomallei RepID=C0YAV5_BURPE
glutamyl-tRNA reductase
scnpilot_expt_750_bf_scaffold_795_24
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26063..27592)
DNA (1530bp) protein (510aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1331258 species="Bacteria; Proteobacte
Threonine dehydratase biosynthetic n=2 Tax=Bordetella bronchiseptica RepID=K0N0Z7_BORBM
ilvA; threonine dehydratase biosynthetic
scnpilot_expt_750_bf_scaffold_795_25
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27659..28153
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S117_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV93673.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis A
hypothetical protein
scnpilot_expt_750_bf_scaffold_795_26
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28207..32361
DNA (4155bp) protein (1385aa)
FAD linked oxidase domain-containing protein n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DLU8_9BURK rbh
FAD linked oxidase, C-terminal domain protein
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:AFT84489.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sour
scnpilot_expt_750_bf_scaffold_795_27
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32378..32863
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UGD3_ALCXX
diadenosine tetraphosphate hydrolase
Diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AIR54221.1}; Uncharacterized protein {ECO:0000313|EMBL:EFV81988.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
scnpilot_expt_750_bf_scaffold_795_28
unknown

Not on your lists

33026..34753
DNA (1728bp) protein (576aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_795_29
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34783..35202
DNA (420bp) protein (140aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KEH7_CUPNH
hypothetical protein Tax=CG_Rhodocyc_01
h16_A0444; hypothetical protein
scnpilot_expt_750_bf_scaffold_795_30
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35219..35959
DNA (741bp) protein (247aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE / 2-heptaprenyl-1,4-naphthoquinone methyltransferase MenG (EC:2.1.1.163)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813, ECO:0000313|EMBL:CDM23166.1};; EC=2.1.1.201 {ECO:0000256|
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=3 Tax=Bordetella holmesii RepID=M5NJT6_9BORD
Displaying items 1-30 of 37 in total

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